RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 FAM84BQ96KN1 310 aaPredicted RBP4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 MEIS3Q99687 375 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 FAM126AQ9BYI3 521 aaPredicted RBP4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 SLC13A1Q9BZW2 595 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 SEMA4BQ9NPR2 832 aaPredicted RBP4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 TMX2Q9Y320 296 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 SNX14Q9Y5W7 946 aa4.18□□□□□ -1.74
NCKAP1-204ENST00000477988 FER1L4A9Z1Z3 1794 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 NOTCH3Q9UM47 2321 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 IGLV5-39A0A0G2JS06 123 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 GABRDO14764 452 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 CLSTN1O94985 981 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 APEHP13798 732 aaKnown RBP4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 KCNA3P22001 575 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 MAP2K6P52564 334 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 COPB1P53618 953 aaKnown RBP4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 NKX6-1P78426 367 aaPredicted RBP4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 ASIC2Q16515 512 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 ZNF280BQ86YH2 543 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 TMEM8AQ9HCN3 771 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 SNX15Q9NRS6 342 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 TRHDEQ9UKU6 1024 aa4.17□□□□□ -1.74
NCKAP1-204ENST00000477988 VNN1O95497 513 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 TNFRSF1BP20333 461 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 B4GALNT1Q00973 533 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 KRT17Q04695 432 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 PLS1Q14651 629 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 AWAT1Q58HT5 328 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 PDXDC1Q6P996 788 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 DCDC5Q6ZRR9 648 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 GAS2L3Q86XJ1 694 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 DDX42Q86XP3 938 aaKnown RBP eCLIP4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 C16orf71Q8IYS4 520 aaPredicted RBP4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 NLRP4Q96MN2 994 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 C17orf80Q9BSJ5 609 aa4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 MRPL44Q9H9J2 332 aaKnown RBP4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 SARS2Q9NP81 518 aaKnown RBP4.16□□□□□ -1.74
NCKAP1-204ENST00000477988 H3BUI4 141 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 MYO1CO00159 1063 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 FGF2P09038 288 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 ATF7P17544 494 aaPredicted RBP4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 UCP3P55916 312 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 STIM1Q13586 685 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 ODF1Q14990 250 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 MLC1Q15049 377 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 ZIK1Q3SY52 487 aaPredicted RBP4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 MANEAQ5SRI9 462 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 C9orf50Q5SZB4 431 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 SDE2Q6IQ49 451 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 USP45Q70EL2 814 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 IGFBPL1Q8WX77 278 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 NR4A3Q92570 626 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 MED16Q9Y2X0 877 aa4.15□□□□□ -1.75
NCKAP1-204ENST00000477988 PRSS47A8MTI9 375 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 ZRANB2O95218 330 aaKnown RBP eCLIP4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 NGFRP08138 427 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 CDC25AP30304 524 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 SLC11A2P49281 568 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 DIO1P49895 249 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 PGGT1BP53609 377 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 PRKAG1P54619 331 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 KCNB1Q14721 858 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 KHDC1LQ5JSQ8 128 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 CERCAMQ5T4B2 595 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 MAFAQ8NHW3 353 aaPredicted RBP4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 CTHRC1Q96CG8 243 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 SLC35A4Q96G79 324 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 ZNF479Q96JC4 524 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 HS6ST2Q96MM7 605 aa4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 TMA7Q9Y2S6 64 aaKnown RBP4.14□□□□□ -1.75
NCKAP1-204ENST00000477988 TMPRSS11DO60235 418 aa4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 TACR3P29371 465 aa4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 IL6STP40189 918 aaPredicted RBP4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 CPA2P48052 419 aa4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 CFHR3Q02985 330 aa4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 CCNIQ14094 377 aa4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 PCDHA6Q9UN73 950 aa4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 DRG1Q9Y295 367 aaKnown RBP4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 TTBK1Q5TCY1 1321 aaPredicted RBP4.13□□□□□ -1.75
NCKAP1-204ENST00000477988 CD63P08962 238 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 BCAT1P54687 386 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 ITKQ08881 620 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 MTMR1Q13613 665 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 PGS1Q32NB8 556 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 CCDC157Q569K6 752 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 DCAF12L1Q5VU92 463 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 CAPRIN2Q6IMN6 1127 aaKnown RBP4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 FBXL22Q6P050 247 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 RFX6Q8HWS3 928 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 FOXP4Q8IVH2 680 aaPredicted RBP4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 BCAS4Q8TDM0 211 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 WIPF2Q8TF74 440 aaPredicted RBP4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 TMEM255BQ8WV15 326 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 PPP2R3CQ969Q6 453 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 SLC25A28Q96A46 364 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 MTFMTQ96DP5 389 aaKnown RBP4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 CDK5RAP3Q96JB5 506 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 TRIM36Q9NQ86 728 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 GJB4Q9NTQ9 266 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 MGAT4CQ9UBM8 478 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms