RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 ENGASEQ8NFI3 743 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 DNASE2BQ8WZ79 361 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 FGF11Q92914 225 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 MYRFLQ96LU7 910 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 MTMR9Q96QG7 549 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 ARHGAP28Q9P2N2 729 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 NXF1Q9UBU9 619 aaKnown RBP10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 IL17BQ9UHF5 180 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 NOL7Q9UMY1 257 aaKnown RBP10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 MYOFQ9NZM1 2061 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 BSNQ9UPA5 3926 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 CYB561D2O14569 222 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 CLDN3O15551 220 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 ADH1CP00326 375 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 NFICP08651 508 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 CLTAP09496 248 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 ADH5P11766 374 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 NCAM1P13591 858 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 CD6P30203 668 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 GRK6P43250 576 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 RPL10AP62906 217 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 STRN3Q13033 797 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 TARDBPQ13148 414 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 RTP5Q14D33 572 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 NFKBIBQ15653 356 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 RILPL1Q5EBL4 403 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 C10orf76Q5T2E6 689 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 ARHGAP40Q5TG30 622 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 DCAF12L1Q5VU92 463 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 SPATA1Q5VX52 437 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 C9orf57Q5W0N0 161 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 KIAA1324Q6UXG2 1013 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 MIB1Q86YT6 1006 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 PHTF2Q8N3S3 785 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 NAT16Q8N8M0 369 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 IPO4Q8TEX9 1081 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 TNFRSF25Q93038 417 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 TMEM176AQ96HP8 235 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 PYM1Q9BRP8 204 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 GPR174Q9BXC1 333 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 TRIM4Q9C037 500 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 NRSN2Q9GZP1 204 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 BHMT2Q9H2M3 363 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 CPNE5Q9HCH3 593 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 CFAP45Q9UL16 551 aa10.4□□□□□ -0.74
SMARCB1-206ENST00000477836 A0A1B0GVT2 93 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 WNT7AO00755 349 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 SLC9A3R1O14745 358 aaPredicted RBP10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 SLC16A4O15374 487 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 BRINP1O60477 761 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 PAX3P23760 479 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 CYP2F1P24903 491 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 RPA1P27694 616 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 ADSSP30520 456 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 PDE6CP51160 858 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 TSPY1Q01534 308 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 MCL1Q07820 350 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 SF3A1Q15459 793 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 WSCD1Q658N2 575 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 SDE2Q6IQ49 451 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 CHPFQ8IZ52 775 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 FAM212AQ96EL1 285 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 TOE1Q96GM8 510 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 NAF1Q96HR8 494 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 SPATA32Q96LK8 384 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 ACOX2Q99424 681 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 LGMNQ99538 433 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 HAPLN2Q9GZV7 340 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 SCAND2PQ9GZW5 306 aaPredicted RBP10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 RPF1Q9H9Y2 349 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 SMPD4Q9NXE4 827 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 FTSJ1Q9UET6 329 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 HCN2Q9UL51 889 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 NFE2L3Q9Y4A8 694 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 RAD54BQ9Y620 910 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 TCHHQ07283 1943 aa10.39□□□□□ -0.75
SMARCB1-206ENST00000477836 PIRO00625 290 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 KCNK3O14649 394 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 HIP1RO75146 1068 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 ACTN2P35609 894 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 TRAPPC10P48553 1259 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 CSNK1EP49674 416 aaKnown RBP10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 TMPRSS3P57727 454 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 GAD2Q05329 585 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 NFE2Q16621 373 aaPredicted RBP10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 KIF19Q2TAC6 998 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 LY6G5CQ5SRR4 150 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 BROXQ5VW32 411 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 BTBD8Q5XKL5 378 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 EGFLAMQ63HQ2 1017 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 JADE1Q6IE81 842 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 USP49Q70CQ1 688 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 SCN4BQ8IWT1 228 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 DAW1Q8N136 415 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 ERMNQ8TAM6 284 aa10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 LEO1Q8WVC0 666 aaPredicted RBP10.38□□□□□ -0.75
SMARCB1-206ENST00000477836 SPIRE2Q8WWL2 714 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms