RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TMEM109Q9BVC6 243 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 TXLNGYQ9BZA5 131 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 DPH5Q9H2P9 285 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 AGO3Q9H9G7 860 aaKnown RBP8.31□□□□□ -1.08
VMA21-203ENST00000477649 LRRC4Q9HBW1 653 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 PCDH9Q9HC56 1237 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 PNPLA8Q9NP80 782 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 CNGB3Q9NQW8 809 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 STARD7Q9NQZ5 370 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 GRHL1Q9NZI5 618 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 ASIC3Q9UHC3 531 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 STAP1Q9ULZ2 295 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 SNX24Q9Y343 169 aa8.31□□□□□ -1.08
VMA21-203ENST00000477649 THSD7BQ9C0I4 1608 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 A0A1W2PQ45 241 aaPredicted RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 A0A1W2PQY0 241 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 TCRBV7S2A1N4TA0A589 114 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 GOLGA6CA6NDK9 693 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 C3orf70A6NLC5 250 aaPredicted RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 M0QZQ0 153 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 AGPSO00116 658 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 PAPSS1O43252 624 aaPredicted RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 TRAPPC3O43617 180 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 DAB1O75553 588 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 PDGFRBP09619 1106 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 FAM153BP0C7A2 387 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 MYZAPP0CAP1 466 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 GOLGA6DP0CG33 693 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 FGFR1P11362 822 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 CKBP12277 381 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 SELPP16109 830 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 TGM2P21980 687 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 NOS2P35228 1153 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 HSD17B3P37058 310 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 ADCY8P40145 1251 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 MATKP42679 507 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 RPL21P46778 160 aaKnown RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 PMS2P54278 862 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 PLTPP55058 493 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 MRPS25P82663 173 aaKnown RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 ORC1Q13415 861 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 MORF4L2Q15014 288 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 TERF2Q15554 542 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 FAM153CQ494X1 144 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 CCDC14Q49A88 953 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 ZNF618Q5T7W0 954 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 AGBL2Q5U5Z8 902 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 WSCD1Q658N2 575 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 DENND2CQ68D51 928 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 ZDHHC24Q6UX98 284 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 THSD4Q6ZMP0 1018 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 GSTA5Q7RTV2 222 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 CPNE8Q86YQ8 564 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 ALLCQ8N6M5 410 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 TSEN2Q8NCE0 465 aaKnown RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 FAM76AQ8TAV0 307 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 SLC35B2Q8TB61 432 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 MYCBPAPQ8TBZ2 947 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 FBXO25Q8TCJ0 367 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 SLC2A14Q8TDB8 520 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 C1orf54Q8WWF1 131 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 IRGQQ8WZA9 623 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 RAPGEF5Q92565 580 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 WNT8BQ93098 351 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 SMARCD1Q96GM5 515 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 SUSD3Q96L08 255 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 ZIM3Q96PE6 472 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 SYT15Q9BQS2 421 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 OXCT2Q9BYC2 517 aaPredicted RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 FRMD8Q9BZ67 464 aaPredicted RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 ROPN1BQ9BZX4 212 aaPredicted RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 PPCSQ9HAB8 311 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 ROPN1Q9HAT0 212 aaPredicted RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 CHST7Q9NS84 486 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 FAM49BQ9NUQ9 324 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 DDX43Q9NXZ2 648 aaKnown RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 GOLGA6AQ9NYA3 693 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.3□□□□□ -1.08
VMA21-203ENST00000477649 FAM153AQ9UHL3 310 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 ZNF148Q9UQR1 794 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 NEU2Q9Y3R4 380 aa8.3□□□□□ -1.08
VMA21-203ENST00000477649 PDCD11Q14690 1871 aaKnown RBP8.3□□□□□ -1.08
VMA21-203ENST00000477649 CARNS1A5YM72 827 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 C9IYK1 514 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 H3BQF6 201 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 MCF2LO15068 1137 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 EIF3HO15372 352 aaKnown RBP eCLIP8.29□□□□□ -1.08
VMA21-203ENST00000477649 B3GAT3O94766 335 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 GJB6O95452 261 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 F9P00740 461 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 KRT14P02533 472 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 LMO2P25791 158 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 KLRC2P26717 231 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ADORA2BP29275 332 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 ATP5DP30049 168 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 GJC1P36383 396 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 FLT3P36888 993 aa8.29□□□□□ -1.08
VMA21-203ENST00000477649 NR2C2P49116 596 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms