RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 NUP210Q8TEM1 1887 aaPredicted RBP17.03■□□□□ 0.32
VHL-203ENST00000477538 DOCK8Q8NF50 2099 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 NCANO14594 1321 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 CCDC195A0A1B0GUA6 201 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 PAPSS1O43252 624 aaPredicted RBP17.02■□□□□ 0.32
VHL-203ENST00000477538 NCK2O43639 380 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 XYLBO75191 536 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 FBXO21O94952 628 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 ZBED1O96006 694 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 H2AFZP0C0S5 128 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 USP17L7P0C7H9 530 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 HMGA1P17096 107 aaKnown RBP17.02■□□□□ 0.32
VHL-203ENST00000477538 ABCB4P21439 1286 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 YWHAQP27348 245 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 MAGEA1P43355 309 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 GALCP54803 685 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 OR6B2Q6IFH4 312 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 TOGARAM2Q6ZUX3 1019 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 FAM183BPQ6ZVS7 135 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 H2AFVQ71UI9 128 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 DNAJB7Q7Z6W7 309 aaPredicted RBP17.02■□□□□ 0.32
VHL-203ENST00000477538 XYLT1Q86Y38 959 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 SCUBE3Q8IX30 993 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 CLEC4CQ8WTT0 213 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 ZNF653Q96CK0 615 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 TRMT2BQ96GJ1 504 aaKnown RBP17.02■□□□□ 0.32
VHL-203ENST00000477538 ZNF512Q96ME7 567 aaPredicted RBP17.02■□□□□ 0.32
VHL-203ENST00000477538 DESI2Q9BSY9 194 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 TTLL2Q9BWV7 592 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 PACSIN1Q9BY11 444 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 PRKD2Q9BZL6 878 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 LUC7LQ9NQ29 371 aaKnown RBP17.02■□□□□ 0.32
VHL-203ENST00000477538 IL37Q9NZH6 218 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 USP3Q9Y6I4 520 aa17.02■□□□□ 0.32
VHL-203ENST00000477538 ANKRD62A6NC57 917 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 ATMINO43313 823 aaPredicted RBP17.01■□□□□ 0.31
VHL-203ENST00000477538 POU2F2P09086 479 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 MYBL1P10243 752 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 FOSL2P15408 326 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 GSCP56915 257 aaPredicted RBP17.01■□□□□ 0.31
VHL-203ENST00000477538 DAOAP59103 153 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 KRT83P78385 493 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 ZNF268Q14587 947 aaPredicted RBP17.01■□□□□ 0.31
VHL-203ENST00000477538 ANKRD54Q6NXT1 300 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 PHLDB2Q86SQ0 1253 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 ZDHHC17Q8IUH5 632 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 SCML4Q8N228 414 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 C12orf76Q8N812 135 aaPredicted RBP17.01■□□□□ 0.31
VHL-203ENST00000477538 FBXO32Q969P5 355 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 THAP2Q9H0W7 228 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 MTMR10Q9NXD2 777 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 CLDND1Q9NY35 253 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 WDR35Q9P2L0 1181 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 CNOT8Q9UFF9 292 aaKnown RBP17.01■□□□□ 0.31
VHL-203ENST00000477538 SCML2Q9UQR0 700 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 REXO2Q9Y3B8 237 aaKnown RBP17.01■□□□□ 0.31
VHL-203ENST00000477538 PCDHA13Q9Y5I0 950 aa17.01■□□□□ 0.31
VHL-203ENST00000477538 REV3LO60673 3130 aa17■□□□□ 0.31
VHL-203ENST00000477538 FAM92AA1XBS5 289 aa17■□□□□ 0.31
VHL-203ENST00000477538 GOLGA8SH3BPF8 625 aa17■□□□□ 0.31
VHL-203ENST00000477538 SART1O43290 800 aaKnown RBP17■□□□□ 0.31
VHL-203ENST00000477538 TMEM253P0C7T8 217 aa17■□□□□ 0.31
VHL-203ENST00000477538 RRM1P23921 792 aa17■□□□□ 0.31
VHL-203ENST00000477538 MRPS5P82675 430 aaKnown RBP17■□□□□ 0.31
VHL-203ENST00000477538 SLC6A3Q01959 620 aa17■□□□□ 0.31
VHL-203ENST00000477538 TAF10Q12962 218 aa17■□□□□ 0.31
VHL-203ENST00000477538 CTC1Q2NKJ3 1217 aa17■□□□□ 0.31
VHL-203ENST00000477538 RARS2Q5T160 578 aaKnown RBP17■□□□□ 0.31
VHL-203ENST00000477538 FAM102AQ5T9C2 384 aaPredicted RBP17■□□□□ 0.31
VHL-203ENST00000477538 PM20D1Q6GTS8 502 aa17■□□□□ 0.31
VHL-203ENST00000477538 OLFML1Q6UWY5 402 aa17■□□□□ 0.31
VHL-203ENST00000477538 TMC5Q6UXY8 1006 aa17■□□□□ 0.31
VHL-203ENST00000477538 EP400NLQ6ZTU2 488 aa17■□□□□ 0.31
VHL-203ENST00000477538 CMASQ8NFW8 434 aaPredicted RBP17■□□□□ 0.31
VHL-203ENST00000477538 CTNNBL1Q8WYA6 563 aaPredicted RBP17■□□□□ 0.31
VHL-203ENST00000477538 IRGQQ8WZA9 623 aa17■□□□□ 0.31
VHL-203ENST00000477538 SMG7Q92540 1137 aaKnown RBP17■□□□□ 0.31
VHL-203ENST00000477538 NDRG1Q92597 394 aaKnown RBP17■□□□□ 0.31
VHL-203ENST00000477538 ZNF707Q96C28 371 aaPredicted RBP17■□□□□ 0.31
VHL-203ENST00000477538 PIWIL1Q96J94 861 aaKnown RBP17■□□□□ 0.31
VHL-203ENST00000477538 MYRFLQ96LU7 910 aa17■□□□□ 0.31
VHL-203ENST00000477538 SLITRK1Q96PX8 696 aa17■□□□□ 0.31
VHL-203ENST00000477538 CORO1BQ9BR76 489 aa17■□□□□ 0.31
VHL-203ENST00000477538 ZNF334Q9HCZ1 680 aaPredicted RBP17■□□□□ 0.31
VHL-203ENST00000477538 UXTQ9UBK9 157 aaPredicted RBP17■□□□□ 0.31
VHL-203ENST00000477538 INTUQ9ULD6 942 aa17■□□□□ 0.31
VHL-203ENST00000477538 ADGRG1Q9Y653 693 aa17■□□□□ 0.31
VHL-203ENST00000477538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17■□□□□ 0.31
VHL-203ENST00000477538 TBX10O75333 385 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 PAPLNO95428 1278 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 HOXB8P17481 243 aaPredicted RBP16.99■□□□□ 0.31
VHL-203ENST00000477538 PTPN2P17706 415 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 SCNN1AP37088 669 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 GPC5P78333 572 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 COL19A1Q14993 1142 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 DNAJC24Q6P3W2 148 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 SYCE2Q6PIF2 218 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 BHLHA9Q7RTU4 235 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 KIAA1328Q86T90 577 aa16.99■□□□□ 0.31
VHL-203ENST00000477538 TMC8Q8IU68 726 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms