RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MSRB2Q9Y3D2 182 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 PCDHB13Q9Y5F0 798 aa7.12□□□□□ -1.27
RTFDC1-206ENST00000477485 PLXNB3Q9ULL4 1909 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 CACNA1EQ15878 2313 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 PTPRJQ12913 1337 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 ZNF840PA6NDX5 716 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 H0Y626 953 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 ADAM23O75077 832 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 TRIM16O95361 564 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 SYPP08247 313 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 SERPINF2P08697 491 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 DLATP10515 647 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 TCF3P15923 654 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 TNNI1P19237 187 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 GARTP22102 1010 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 STAT6P42226 847 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 CASP5P51878 434 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 TNNC1P63316 161 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 FAM193AP78312 1265 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC7A9P82251 487 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 POU5F1Q01860 360 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 CEBPZQ03701 1054 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 GAD2Q05329 585 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 ZNF33AQ06730 810 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 GAB4Q2WGN9 574 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 MAP7D1Q3KQU3 841 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 PLEKHG6Q3KR16 790 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 HSF5Q4G112 596 aaPredicted RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 LARP1BQ659C4 914 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 FAM171BQ6P995 826 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC23A3Q6PIS1 610 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 RHBDF2Q6PJF5 856 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 KIAA1324Q6UXG2 1013 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 SLC36A4Q6YBV0 504 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 TRMT11Q7Z4G4 463 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 RABEPKQ7Z6M1 372 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 CHPFQ8IZ52 775 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 ADGRG2Q8IZP9 1017 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 PNPLA1Q8N8W4 532 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 RDH13Q8NBN7 331 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 OR5B17Q8NGF7 314 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 OLIG1Q8TAK6 271 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 CEP76Q8TAP6 659 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 MYCBPAPQ8TBZ2 947 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 KBTBD7Q8WVZ9 684 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 HSPA12BQ96MM6 686 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 CAMK1GQ96NX5 476 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 MRPL45Q9BRJ2 306 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 PANK4Q9NVE7 773 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 DNAJC17Q9NVM6 304 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 TBC1D14Q9P2M4 693 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 DEC1Q9P2X7 70 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 SEL1LQ9UBV2 794 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 STK17AQ9UEE5 414 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 SIX4Q9UIU6 781 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 PILRBQ9UKJ0 227 aa7.11□□□□□ -1.27
RTFDC1-206ENST00000477485 ATP8B3O60423 1300 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 ZZEF1O43149 2961 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 SHROOM3Q8TF72 1996 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 WDFY3Q8IZQ1 3526 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 ZNF233A6NK53 670 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 EIF4E1BA6NMX2 242 aaKnown RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 MEI4A8MW99 385 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 A8MXQ7 604 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 NEDD8-MDP1E9PL57 170 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 CLDN5O00501 218 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 ARHGAP33O14559 1287 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 GABRDO14764 452 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 SH3BP5O60239 455 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 PHACTR2O75167 634 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 TULP3O75386 442 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 PPP1R37O75864 691 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 OAS1P00973 400 aaKnown RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 FTH1P19P0C7X4 201 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 PFKLP17858 780 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 GABRG2P18507 467 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 WARSP23381 471 aaKnown RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 YWHAQP27348 245 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 GNL1P36915 607 aaPredicted RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 EIF2DP41214 584 aaKnown RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 TNFRSF4P43489 277 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 KIR2DL1P43626 348 aaPredicted RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 PPP3CCP48454 512 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 SEMA3BQ13214 749 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 TRPC3Q13507 836 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 ALCAMQ13740 583 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 TRIP6Q15654 476 aaKnown RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 DUOXA2Q1HG44 320 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 ZNF423Q2M1K9 1284 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 PREPLQ4J6C6 727 aaPredicted RBP7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 GRAMD4Q6IC98 578 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 TPGS1Q6ZTW0 290 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 STXBP4Q6ZWJ1 553 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 USP49Q70CQ1 688 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 DPH6Q7L8W6 267 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 BRAPQ7Z569 592 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 NAXDQ8IW45 347 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 BBS7Q8IWZ6 715 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 TRIML1Q8N9V2 468 aa7.1□□□□□ -1.27
RTFDC1-206ENST00000477485 PDZD8Q8NEN9 1154 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms