RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MYL7Q01449 175 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 GRSF1Q12849 480 aaKnown RBP eCLIP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 BFSP1Q12934 665 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 DHX8Q14562 1220 aaKnown RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 SEZ6Q53EL9 994 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 C9orf57Q5W0N0 161 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 LARP1BQ659C4 914 aaKnown RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 KCNK18Q7Z418 384 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 FSIP1Q8NA03 581 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 SPATA18Q8TC71 538 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 NUDT8Q8WV74 236 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 LARP4BQ92615 738 aaKnown RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 MRPS31Q92665 395 aaKnown RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 LOXL4Q96JB6 756 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 REEP2Q9BRK0 252 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 LRRC27Q9C0I9 530 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 BHLHE41Q9C0J9 482 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 ST6GALNAC4Q9H4F1 302 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 DPP3Q9NY33 737 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 STK17AQ9UEE5 414 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 CPSF3Q9UKF6 684 aaKnown RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 AGO2Q9UKV8 859 aaKnown RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 SLC8A2Q9UPR5 921 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 PCDHB5Q9Y5E4 795 aa7.81□□□□□ -1.16
BRCA1-214ENST00000477152 TIMM13Q9Y5L4 95 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-214ENST00000477152 CCDC163A0A0D9SF12 145 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 KIAA0391O15091 583 aaKnown RBP7.8□□□□□ -1.16
BRCA1-214ENST00000477152 PAGE1O75459 146 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 CDC25BP30305 580 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 DDIT3P35638 169 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 ST13P50502 369 aaKnown RBP7.8□□□□□ -1.16
BRCA1-214ENST00000477152 ZNF131P52739 623 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 SPAG1Q07617 926 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 FZD5Q13467 585 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 CSRP2Q16527 193 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 IL17AQ16552 155 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 FBXO43Q4G163 708 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 SLC39A12Q504Y0 691 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 IL31Q6EBC2 164 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 JADE1Q6IE81 842 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 TSSK4Q6SA08 328 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 C12orf50Q8NA57 414 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-214ENST00000477152 POMGNT1Q8WZA1 660 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 RAD54LQ92698 747 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 ZSWIM3Q96MP5 696 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 MDFIQ99750 246 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 LPIN3Q9BQK8 851 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 PYM1Q9BRP8 204 aaKnown RBP7.8□□□□□ -1.16
BRCA1-214ENST00000477152 TGIF2Q9GZN2 237 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 ZCWPW1Q9H0M4 648 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 CAPN10Q9HC96 672 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 TLR6Q9Y2C9 796 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 SLC38A8A6NNN8 435 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 PIRO00625 290 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 HUS1O60921 280 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 MOSPD3O75425 235 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 AKAP3O75969 853 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 OR4Q2P0C623 313 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 GJA1P17302 382 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 TNFSF9P41273 254 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 ATXN1P54253 815 aaKnown RBP7.8□□□□□ -1.16
BRCA1-214ENST00000477152 PDGFRLQ15198 375 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 SURF1Q15526 300 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 SV2BQ7L1I2 683 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 C11orf74Q86VG3 221 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 WDR5BQ86VZ2 330 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 TMC8Q8IU68 726 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 SYCP3Q8IZU3 236 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 TMEM86AQ8N2M4 240 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 ATAD1Q8NBU5 361 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 ACCSQ96QU6 501 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 TMEM209Q96SK2 561 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 CCSER1Q9C0I3 900 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 CCSER2Q9H7U1 834 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 SPTBN4Q9H254 2564 aa7.8□□□□□ -1.16
BRCA1-214ENST00000477152 MED19A0JLT2 244 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ANO9A1A5B4 782 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 KPNA7A9QM74 516 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 SLC30A4O14863 429 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CENPBP07199 599 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ARAFP10398 606 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 HAPLN1P10915 354 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 DRD1P21728 446 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ITPKAP23677 461 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 IGFBP6P24592 240 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 PCSK1P29120 753 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 MYO1EQ12965 1108 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 KARSQ15046 597 aaKnown RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 MAPRE1Q15691 268 aaKnown RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ARSHQ5FYA8 562 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 PSAPL1Q6NUJ1 521 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CACNA2D4Q7Z3S7 1137 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CMTM8Q8IZV2 173 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CPA6Q8N4T0 437 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CAMKK1Q8N5S9 505 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 TMX3Q96JJ7 454 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 LRRC3Q9BY71 257 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 TMEM206Q9H813 350 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 MRPL44Q9H9J2 332 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms