RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 FLT1P17948 1338 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SALL3Q9BXA9 1300 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 DIP2AQ14689 1571 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 A0A087X0B3 334 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 C1orf232A0A0U1RR37 186 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 OR5K3A6NET4 321 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 UBAP1LF5GYI3 381 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 PSMD11O00231 422 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 E2F3O00716 465 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 FZD6O60353 706 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 EXOC3O60645 756 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 CCDC22O60826 627 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 JRKO75564 520 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 PGM3O95394 542 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ADH1CP00326 375 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 GNRH1P01148 92 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 JAK1P23458 1154 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 CDK9P50750 372 aaKnown RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 CASP5P51878 434 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 FOLH1Q04609 750 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 OCA2Q04671 838 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 CD300CQ08708 224 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 LRRC74AQ0VAA2 488 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SF3A3Q12874 501 aaKnown RBP eCLIP4.31□□□□□ -1.72
CD55-208ENST00000476590 CDC16Q13042 620 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 PPP2R5CQ13362 524 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 PIN1Q13526 163 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 ATP1A4Q13733 1029 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 KRT81Q14533 505 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ZNF124Q15973 351 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 UAP1Q16222 522 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 NFIL3Q16649 462 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 LSM12Q3MHD2 195 aaKnown RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 ERFEQ4G0M1 354 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 C6orf10Q5SRN2 563 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 FAM102BQ5T8I3 360 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 C6orf163Q5TEZ5 329 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 XRRA1Q6P2D8 792 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 STRA8Q7Z7C7 330 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ZNF410Q86VK4 478 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 GALNT13Q8IUC8 556 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 KSR1Q8IVT5 923 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 TPH2Q8IWU9 490 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 CDH26Q8IXH8 852 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SYTL1Q8IYJ3 562 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 TCAIMQ8N3R3 496 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 FAM160A2Q8N612 972 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 MAGEB6Q8N7X4 407 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ZNF565Q8N9K5 539 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 OR2W6PQ8NHA6 318 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 LHFPL5Q8TAF8 219 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SPATA18Q8TC71 538 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ADAMTS16Q8TE57 1224 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 CPLX3Q8WVH0 158 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SCFD1Q8WVM8 642 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ANKS1AQ92625 1134 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 VPS33AQ96AX1 596 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 TAMM41Q96BW9 452 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SLC7A6OSQ96CW6 309 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 HDAC11Q96DB2 347 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ANAPC16Q96DE5 110 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 RBM18Q96H35 190 aaKnown RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 ARL5BQ96KC2 179 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SERPINB12Q96P63 405 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 WACQ9BTA9 647 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 HEMGNQ9BXL5 484 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ZNF717Q9BY31 904 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 SENP6Q9GZR1 1112 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 PAIP1Q9H074 479 aaKnown RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 LSG1Q9H089 658 aaKnown RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 CCDC113Q9H0I3 377 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ISCUQ9H1K1 167 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 TP63Q9H3D4 680 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 GHITMQ9H3K2 345 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 CUEDC2Q9H467 287 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 MRPL40Q9NQ50 206 aaKnown RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 OLFML3Q9NRN5 406 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ABHD10Q9NUJ1 306 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 USP40Q9NVE5 1235 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 PAQR5Q9NXK6 330 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 OBP2AQ9NY56 170 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ANKMY1Q9P2S6 941 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SALL4Q9UJQ4 1053 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 GMEB2Q9UKD1 530 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 NUP50Q9UKX7 468 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 SNX5Q9Y5X3 404 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 CACNG2Q9Y698 323 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 URB2Q14146 1524 aaKnown RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 MAGI1Q96QZ7 1491 aaPredicted RBP4.31□□□□□ -1.72
CD55-208ENST00000476590 LRRIQ1Q96JM4 1722 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 USP31Q70CQ4 1352 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ARAP3Q8WWN8 1544 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 A6NL46 340 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 hCG_2039718K7EN88 272 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 HOXC11O43248 304 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 PI15O43692 258 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 DTNBO60941 627 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ADAM11O75078 769 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms