RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 CDH6P55285 790 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 EIF3EP60228 445 aaKnown RBP16.7■□□□□ 0.26
VARS2-207ENST00000476162 GAD2Q05329 585 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 PDIA2Q13087 525 aaKnown RBP16.7■□□□□ 0.26
VARS2-207ENST00000476162 ANKRD22Q5VYY1 191 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 CENPUQ71F23 418 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 TAB3Q8N5C8 712 aaPredicted RBP16.7■□□□□ 0.26
VARS2-207ENST00000476162 MIS12Q9H081 205 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 NXF3Q9H4D5 531 aaKnown RBP16.7■□□□□ 0.26
VARS2-207ENST00000476162 RSAD1Q9HA92 442 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 NRCAMQ92823 1304 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 BANF1O75531 89 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 F2P00734 622 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 GCAP28676 217 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 PEX19P40855 299 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 ATP11AP98196 1134 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 ADCY1Q08828 1119 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 STILQ15468 1287 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 PKDCCQ504Y2 493 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 NOTUMQ6P988 496 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 PCGF5Q86SE9 256 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 SPATA18Q8TC71 538 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 CPT1BQ92523 772 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 LENG1Q96BZ8 264 aaPredicted RBP16.7■□□□□ 0.26
VARS2-207ENST00000476162 FAM210AQ96ND0 272 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 APOL6Q9BWW8 343 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 VPS37BQ9H9H4 285 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 CPSF2Q9P2I0 782 aaKnown RBP16.7■□□□□ 0.26
VARS2-207ENST00000476162 SLC15A5A6NIM6 579 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 ENDOD1O94919 500 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 ATP6V1G2O95670 118 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 RBP3P10745 1247 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 CYP2C9P11712 490 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 DARSP14868 501 aaKnown RBP16.69■□□□□ 0.26
VARS2-207ENST00000476162 AKAP5P24588 427 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 HIC1Q14526 733 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 TMED2Q15363 201 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 HIF1AQ16665 826 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 CCDC14Q49A88 953 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 NPNTQ6UXI9 565 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 BZW1Q7L1Q6 419 aaKnown RBP16.69■□□□□ 0.26
VARS2-207ENST00000476162 APBB1IPQ7Z5R6 666 aaPredicted RBP16.69■□□□□ 0.26
VARS2-207ENST00000476162 PIGWQ7Z7B1 504 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 SCUBE3Q8IX30 993 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 PPIL6Q8IXY8 311 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 FAM71DQ8N9W8 422 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 BEST2Q8NFU1 509 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 NSMCE1Q8WV22 266 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 MAML1Q92585 1016 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 LPIN3Q9BQK8 851 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 MAK16Q9BXY0 300 aaKnown RBP16.69■□□□□ 0.26
VARS2-207ENST00000476162 NOD2Q9HC29 1040 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 GJD2Q9UKL4 321 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 POC1B-GALNT4F8VUJ3 575 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 NDC80O14777 642 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 PRPSAP2O60256 369 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 RECQL4O94761 1208 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 NRLP54845 237 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 FKBP1BP68106 108 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 CDC42EP1Q00587 391 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 GPR162Q16538 588 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 OLFML1Q6UWY5 402 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 ANKMY2Q8IV38 441 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 NAT8LQ8N9F0 302 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 CCDC197Q8NCU1 140 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 OR6B3Q8NGW1 331 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 DNAJB3Q8WWF6 145 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 ELAC2Q9BQ52 826 aaKnown RBP16.69■□□□□ 0.26
VARS2-207ENST00000476162 CPA4Q9UI42 421 aa16.69■□□□□ 0.26
VARS2-207ENST00000476162 GNEQ9Y223 722 aaKnown RBP16.69■□□□□ 0.26
VARS2-207ENST00000476162 SMIM35A0A1B0GVV1 85 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 MBLAC1A4D2B0 266 aaPredicted RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 RASA4BC9J798 803 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 MCF2LO15068 1137 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 RASA4O43374 803 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 HCRTO43612 131 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 DNAJC8O75937 253 aaPredicted RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 RPS6KA3P51812 740 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 DPYSL3Q14195 570 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 SOWAHAQ2M3V2 549 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 C9orf57Q5W0N0 161 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 SCYL2Q6P3W7 929 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 ALKAL1Q6UXT8 129 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 RIBC1Q8N443 379 aaPredicted RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 LRRC52Q8N7C0 313 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 SPDYE1Q8NFV5 336 aaPredicted RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 SLC35F5Q8WV83 523 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 TMEM40Q8WWA1 233 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 KHSRPQ92945 711 aaKnown RBP eCLIP16.68■□□□□ 0.26
VARS2-207ENST00000476162 SLC4A5Q9BY07 1137 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 DPEP3Q9H4B8 488 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 TCRBV7S3A2A0A539 114 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 GABBR2O75899 941 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 CELF2O95319 508 aaKnown RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 ELF3P78545 371 aaPredicted RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 FNBP1LQ5T0N5 605 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 OLFML2BQ68BL8 750 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 CAPRIN2Q6IMN6 1127 aaKnown RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 TMEM110Q86TL2 294 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 ZC3H18Q86VM9 953 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms