RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 TRPC3Q13507 836 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 HSF5Q4G112 596 aaPredicted RBP13.2□□□□□ -0.3
CCDC57-208ENST00000475635 EMC10Q5UCC4 262 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 NELFCDQ8IXH7 590 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 NUP93Q8N1F7 819 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 XXYLT1Q8NBI6 393 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 LINC00301Q8NCQ3 95 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 B3GALNT2Q8NCR0 500 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 OLIG1Q8TAK6 271 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 ZNF516Q92618 1163 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 FBXO32Q969P5 355 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
CCDC57-208ENST00000475635 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 BCCIPQ9P287 314 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC57-208ENST00000475635 TBC1D14Q9P2M4 693 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 NXF1Q9UBU9 619 aaKnown RBP13.2□□□□□ -0.3
CCDC57-208ENST00000475635 AKAP13Q12802 2813 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 UBE4BO95155 1302 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 A0A0A0MRY4 1105 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 E2F8A0AVK6 867 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.19□□□□□ -0.3
CCDC57-208ENST00000475635 CDX4O14627 284 aaPredicted RBP13.19□□□□□ -0.3
CCDC57-208ENST00000475635 SPTLC2O15270 562 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 MAP3K13O43283 966 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 COCHO43405 550 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 STX6O43752 255 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
CCDC57-208ENST00000475635 STAU1O95793 577 aaKnown RBP13.19□□□□□ -0.3
CCDC57-208ENST00000475635 P2RY2P41231 377 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 GRIA2P42262 883 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 FOXC1Q12948 553 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 EOGTQ5NDL2 527 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 LY6G5CQ5SRR4 150 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 CNNM4Q6P4Q7 775 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 FRMD1Q8N878 549 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 IQUBQ8NA54 791 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 PDZD8Q8NEN9 1154 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 SCFD1Q8WVM8 642 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 HMGB4Q8WW32 186 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 INTS4Q96HW7 963 aaKnown RBP13.19□□□□□ -0.3
CCDC57-208ENST00000475635 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 KCNK16Q96T55 309 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 GZF1Q9H116 711 aaPredicted RBP13.19□□□□□ -0.3
CCDC57-208ENST00000475635 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 ZDHHC4Q9NPG8 344 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 PCDH15Q96QU1 1955 aa13.19□□□□□ -0.3
CCDC57-208ENST00000475635 ZZEF1O43149 2961 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 TCRBV21S2A2A0A5A6 115 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 ADAM23O75077 832 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 PHACTR2O75167 634 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 PPP6R2O75170 966 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 PROS1P07225 676 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 CEACAM1P13688 526 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 CSRP1P21291 193 aaKnown RBP13.18□□□□□ -0.3
CCDC57-208ENST00000475635 ATICP31939 592 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 TNFRSF4P43489 277 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
CCDC57-208ENST00000475635 GAD2Q05329 585 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 TRIM61Q5EBN2 209 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 HECTD3Q5T447 861 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 UNC13DQ70J99 1090 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 ARMCX6Q7L4S7 300 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 TMEFF1Q8IYR6 380 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 PHTF2Q8N3S3 785 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 SCAMP5Q8TAC9 235 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 OVCA2Q8WZ82 227 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 SYAP1Q96A49 352 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-208ENST00000475635 ZFRQ96KR1 1074 aaKnown RBP13.18□□□□□ -0.3
CCDC57-208ENST00000475635 C7orf25Q9BPX7 421 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 CHORDC1Q9UHD1 332 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-208ENST00000475635 EVLQ9UI08 416 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-208ENST00000475635 MBD1Q9UIS9 605 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-208ENST00000475635 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
CCDC57-208ENST00000475635 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 KNL1Q8NG31 2342 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 TBC1D3BA6NDS4 549 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 C1QTNF9BB2RNN3 333 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 TNFRSF10BO14763 440 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 CLSTN1O94985 981 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 C1QTNF9P0C862 333 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 SPINK2P20155 84 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 CASP1P29466 404 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 PTGER3P43115 390 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 CASP4P49662 377 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 SLC5A3P53794 718 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 CDH8P55286 799 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 EHHADHQ08426 723 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 LMAN2Q12907 356 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 MAP7D1Q3KQU3 841 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 SNX30Q5VWJ9 437 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 SHC4Q6S5L8 630 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 UNQ6494/PRO21346Q6UXR6 183 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 FAM35AQ86V20 835 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms