RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MLLT6P55198 1093 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 SMARCB1Q12824 385 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 TTLL4Q14679 1199 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 Q3ZCU0 254 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 GTF2IRD2BQ6EKJ0 949 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 C4orf22Q6V702 233 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 KIF6Q6ZMV9 814 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 TRPM8Q7Z2W7 1104 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 ATG9AQ7Z3C6 839 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 TBC1D1Q86TI0 1168 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 GTF2IRD2Q86UP8 949 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 FAM83AQ86UY5 434 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 LONP2Q86WA8 852 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 ARHGAP24Q8N264 748 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 MAGEB6Q8N7X4 407 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 TMEM145Q8NBT3 493 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 RNF169Q8NCN4 708 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 TTLL11Q8NHH1 800 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 EXD1Q8NHP7 514 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 PIP4K2CQ8TBX8 421 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 ENKURQ8TC29 256 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 UBASH3BQ8TF42 649 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 PYROXD1Q8WU10 500 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 PPP1R13LQ8WUF5 828 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 JPH3Q8WXH2 748 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 RIN2Q8WYP3 895 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 ARL5BQ96KC2 179 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 FAM20AQ96MK3 541 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 TSGA13Q96PP4 275 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 PANX2Q96RD6 677 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 CDRT15Q96T59 188 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 RHOBTB2Q9BYZ6 727 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 MTMR12Q9C0I1 747 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 RAB17Q9H0T7 212 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 FANCEQ9HB96 536 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 PALMDQ9NP74 551 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 C9orf78Q9NZ63 289 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 ADAM22Q9P0K1 906 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 THEGQ9P2T0 379 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 STOML1Q9UBI4 398 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 ASIC3Q9UHC3 531 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 IFT52Q9Y366 437 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 DCCP43146 1447 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 ACEP12821 1306 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 ABCC12Q96J65 1359 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 GOLGA8QA0A0J9YX86 632 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ARHGAP10A1A4S6 786 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 GOLGA8OA6NCC3 632 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 PRSS47A8MTI9 375 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 GOLGA8NF8WBI6 632 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 INO80B-WBP1J3KQ70 363 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 SLC22A1O15245 554 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ALOX15BO15296 676 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 HDAC3O15379 428 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 RNMTO43148 476 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 GPC4O75487 556 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ABLIM3O94929 683 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 DDX58O95786 925 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 GNAI2P04899 355 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 SNRPB2P08579 225 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 NCAM1P13591 858 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 NID1P14543 1247 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 FSTP19883 344 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 CD68P34810 354 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 PPARGP37231 505 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 VHLP40337 213 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 UBA7P41226 1012 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ASMTP46597 345 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 GALK1P51570 392 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ALDH5A1P51649 535 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 RAD23BP54727 409 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 EPHB4P54760 987 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 RPS3AP61247 264 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 POLR2GP62487 172 aaKnown RBP eCLIP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 NOP14P78316 857 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 CYP4F2P78329 520 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 CEBPZQ03701 1054 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 CYP4F3Q08477 520 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 MAP4K2Q12851 820 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 PRSS53Q2L4Q9 553 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 LETM2Q2VYF4 491 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 LEXMQ3ZCV2 418 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 HERC4Q5GLZ8 1057 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 SPDYAQ5MJ70 313 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 EXOSC6Q5RKV6 272 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 CCNJQ5T5M9 372 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 SPOPLQ6IQ16 392 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 FAM171BQ6P995 826 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 KLHL35Q6PF15 583 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ABRAXAS1Q6UWZ7 409 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 CCNI2Q6ZMN8 369 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 IDO2Q6ZQW0 420 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 PRR23CQ6ZRP0 262 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 CYP4V2Q6ZWL3 525 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 MAMDC2Q7Z304 686 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 MMAAQ8IVH4 418 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ELMOD1Q8N336 334 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 NATD1Q8N6N6 113 aa6.25□□□□□ -1.41
ECHDC1-215ENST00000475319 ATP6V0D2Q8N8Y2 350 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms