RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 RHBDF2Q6PJF5 856 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 STXBP4Q6ZWJ1 553 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 SV2BQ7L1I2 683 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 HS2ST1Q7LGA3 356 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 LIMS2Q7Z4I7 341 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 PROSER1Q86XN7 944 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 MINDY1Q8N5J2 469 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
SKA3-206ENST00000475251 KBTBD7Q8WVZ9 684 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 OVCA2Q8WZ82 227 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 PCED1BQ96HM7 432 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 ELOVL4Q9GZR5 314 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 SNX25Q9H3E2 840 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 CAPN10Q9HC96 672 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 PDE11AQ9HCR9 933 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 CRTAC1Q9NQ79 661 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 INTS13Q9NVM9 706 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 DEC1Q9P2X7 70 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 SH3BP1Q9Y3L3 701 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 ASCC3Q8N3C0 2202 aaKnown RBP13.41□□□□□ -0.26
SKA3-206ENST00000475251 GOLGA8IPA6NC78 632 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 GOLGA8JA6NMD2 632 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 F8VP50 259 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 ARHGAP33O14559 1287 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 ADAM23O75077 832 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 RTN3O95197 1032 aaPredicted RBP13.41□□□□□ -0.26
SKA3-206ENST00000475251 PDGFRBP09619 1106 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 FAM163BP0C2L3 166 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 HOXB2P14652 356 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 TAF10Q12962 218 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 RABEP1Q15276 862 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
SKA3-206ENST00000475251 LY6G5CQ5SRR4 150 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 EMC10Q5UCC4 262 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 RRAGBQ5VZM2 374 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 SDE2Q6IQ49 451 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 C12orf40Q86WS4 652 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 FRMD1Q8N878 549 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 KIF2CQ99661 725 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
SKA3-206ENST00000475251 CBWD1Q9BRT8 395 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 FAM124BQ9H5Z6 455 aaPredicted RBP13.41□□□□□ -0.26
SKA3-206ENST00000475251 DNAAF2Q9NVR5 837 aaKnown RBP13.41□□□□□ -0.26
SKA3-206ENST00000475251 TBC1D7Q9P0N9 293 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 SUSD2Q9UGT4 822 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 PCDHB9Q9Y5E1 797 aa13.41□□□□□ -0.26
SKA3-206ENST00000475251 IGF2RP11717 2491 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 A0A1W2PQD8 194 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 ANTXRLA6NF34 631 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 ZNF233A6NK53 670 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 HOXC11O43248 304 aaPredicted RBP13.4□□□□□ -0.26
SKA3-206ENST00000475251 TACC1O75410 805 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 PRPF6O94906 941 aaKnown RBP13.4□□□□□ -0.26
SKA3-206ENST00000475251 CHRM1P11229 460 aaPredicted RBP13.4□□□□□ -0.26
SKA3-206ENST00000475251 IDEP14735 1019 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 GNSP15586 552 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 YWHAQP27348 245 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 GNL1P36915 607 aaPredicted RBP13.4□□□□□ -0.26
SKA3-206ENST00000475251 GRIN1Q05586 938 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 MDH1BQ5I0G3 518 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 C10orf76Q5T2E6 689 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 SYCP2LQ5T4T6 812 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 LARP1BQ659C4 914 aaKnown RBP13.4□□□□□ -0.26
SKA3-206ENST00000475251 RAB44Q7Z6P3 723 aaPredicted RBP13.4□□□□□ -0.26
SKA3-206ENST00000475251 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 SFTPA1Q8IWL2 248 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 PHTF2Q8N3S3 785 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 CHCHD4Q8N4Q1 142 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 ZSWIM2Q8NEG5 633 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 PCIF1Q9H4Z3 704 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 KIAA1586Q9HCI6 787 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 CALCOCO1Q9P1Z2 691 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 SMC3Q9UQE7 1217 aa13.4□□□□□ -0.26
SKA3-206ENST00000475251 ATP8B3O60423 1300 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 PCNX2A6NKB5 2137 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 TAF4O00268 1085 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 TULP3O75386 442 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 GABRG2P18507 467 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 NTSR1P30989 418 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 TUBP50607 506 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 TNNC1P63316 161 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 IFRD2Q12894 506 aaPredicted RBP13.39□□□□□ -0.27
SKA3-206ENST00000475251 TRIP6Q15654 476 aaKnown RBP13.39□□□□□ -0.27
SKA3-206ENST00000475251 ANO4Q32M45 955 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 HECTD3Q5T447 861 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 CCDC73Q6ZRK6 1079 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 ETFBKMTQ8IXQ9 262 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 NUP93Q8N1F7 819 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 TERB1Q8NA31 727 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 OR6B3Q8NGW1 331 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 FOXJ1Q92949 421 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 FBXO32Q969P5 355 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 DNAJC19Q96DA6 116 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 EPSTI1Q96J88 318 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 TMX3Q96JJ7 454 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
SKA3-206ENST00000475251 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
SKA3-206ENST00000475251 PI4KAP42356 2102 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms