RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 OSCP1Q8WVF1 389 aa10□□□□□ -0.81
PDPN-204ENST00000475043 FBXO32Q969P5 355 aa10□□□□□ -0.81
PDPN-204ENST00000475043 HINFPQ9BQA5 517 aa10□□□□□ -0.81
PDPN-204ENST00000475043 IER2Q9BTL4 223 aa10□□□□□ -0.81
PDPN-204ENST00000475043 TTLL2Q9BWV7 592 aa10□□□□□ -0.81
PDPN-204ENST00000475043 DMAP1Q9NPF5 467 aaPredicted RBP10□□□□□ -0.81
PDPN-204ENST00000475043 HPS4Q9NQG7 708 aa10□□□□□ -0.81
PDPN-204ENST00000475043 KRT82Q9NSB4 513 aa10□□□□□ -0.81
PDPN-204ENST00000475043 GCNT4Q9P109 453 aa10□□□□□ -0.81
PDPN-204ENST00000475043 WNT6Q9Y6F9 365 aa10□□□□□ -0.81
PDPN-204ENST00000475043 MYO15AQ9UKN7 3530 aa10□□□□□ -0.81
PDPN-204ENST00000475043 TRIM49BA6NDI0 452 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 OTOL1A6NHN0 477 aaPredicted RBP9.99□□□□□ -0.81
PDPN-204ENST00000475043 STX10O60499 249 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 ADORA2BP29275 332 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 GTF2H1P32780 548 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 CXCL12P48061 93 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 MXI1P50539 228 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 SLC5A3P53794 718 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 MAP3K7CLP57077 242 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 FKBP3Q00688 224 aaKnown RBP9.99□□□□□ -0.81
PDPN-204ENST00000475043 AMPD2Q01433 879 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 ENPEPQ07075 957 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 USP4Q13107 963 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 DGKKQ5KSL6 1271 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 ANKRD40Q6AI12 368 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 Q6ZS52 159 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 NUDT18Q6ZVK8 323 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 CRYBG2Q8N1P7 616 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 CPA6Q8N4T0 437 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 FBXL13Q8NEE6 735 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 PDZD8Q8NEN9 1154 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 SCAMP5Q8TAC9 235 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 ATP2A3Q93084 1043 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 JAKMIP2Q96AA8 810 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 NT5C1AQ9BXI3 368 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 GTPBP4Q9BZE4 634 aaKnown RBP9.99□□□□□ -0.81
PDPN-204ENST00000475043 DNAI2Q9GZS0 605 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 NIF3L1Q9GZT8 377 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 RNF38Q9H0F5 515 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 CYP3A43Q9HB55 503 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 APOBEC3GQ9HC16 384 aaKnown RBP9.99□□□□□ -0.81
PDPN-204ENST00000475043 PRMT8Q9NR22 394 aaPredicted RBP9.99□□□□□ -0.81
PDPN-204ENST00000475043 ZSCAN32Q9NX65 697 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 SMPD4Q9NXE4 827 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 CHORDC1Q9UHD1 332 aaPredicted RBP9.99□□□□□ -0.81
PDPN-204ENST00000475043 ARHGAP26Q9UNA1 814 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 PCDHGA2Q9Y5H1 932 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 CPQQ9Y646 472 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 CACNA1IQ9P0X4 2223 aa9.99□□□□□ -0.81
PDPN-204ENST00000475043 LEFTY2O00292 366 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 PSMA7O14818 248 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 GADD45BO75293 160 aaPredicted RBP9.98□□□□□ -0.81
PDPN-204ENST00000475043 BEST1O76090 585 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 FAM200BP0CF97 657 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 MBL2P11226 248 aaPredicted RBP9.98□□□□□ -0.81
PDPN-204ENST00000475043 PFKLP17858 780 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 MLLT3P42568 568 aaPredicted RBP9.98□□□□□ -0.81
PDPN-204ENST00000475043 PMS1P54277 932 aaKnown RBP9.98□□□□□ -0.81
PDPN-204ENST00000475043 NRLP54845 237 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 ZXDBP98169 803 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 SATB1Q01826 763 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 LRRC63Q05C16 580 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 INCA1Q0VD86 236 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 GRSF1Q12849 480 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDPN-204ENST00000475043 NR1H3Q13133 447 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 CCINQ13939 588 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 GAS6Q14393 721 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 ZNF394Q53GI3 561 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 COBLL1Q53SF7 1204 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 WDR44Q5JSH3 913 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 KLHL10Q6JEL2 608 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 SPEM1Q8N4L4 309 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 SPATA20Q8TB22 786 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 SEMA4DQ92854 862 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 EXOC4Q96A65 974 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 CYFIP2Q96F07 1278 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 TWNKQ96RR1 684 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 SMOQ99835 787 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 FAM126AQ9BYI3 521 aaPredicted RBP9.98□□□□□ -0.81
PDPN-204ENST00000475043 NACA2Q9H009 215 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 LINC00597Q9H2U6 94 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 ECT2Q9H8V3 914 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 RAB20Q9NX57 234 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 MAN1B1Q9UKM7 699 aa9.98□□□□□ -0.81
PDPN-204ENST00000475043 BIN1O00499 593 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 TNFRSF10BO14763 440 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 SCAMP3O14828 347 aaKnown RBP9.97□□□□□ -0.81
PDPN-204ENST00000475043 SLC16A3O15427 465 aaKnown RBP9.97□□□□□ -0.81
PDPN-204ENST00000475043 COCHO43405 550 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 CILPO75339 1184 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 NFATC1O95644 943 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 OAS1P00973 400 aaKnown RBP9.97□□□□□ -0.81
PDPN-204ENST00000475043 TCF3P15923 654 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 GJA4P35212 333 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 GALK1P51570 392 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 SLC7A9P82251 487 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 EML3Q32P44 896 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 CBWD6Q4V339 395 aa9.97□□□□□ -0.81
PDPN-204ENST00000475043 TMEM196Q5HYL7 178 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms