RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ZNF516Q92618 1163 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 PBKQ96KB5 322 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 B3GALT6Q96L58 329 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 POP1Q99575 1024 aaKnown RBP4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 ACBD6Q9BR61 282 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 CAPS2Q9BXY5 557 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 STK33Q9BYT3 514 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 SNX25Q9H3E2 840 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 MAN1C1Q9NR34 630 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 CLEC1BQ9P126 229 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 PRKAG3Q9UGI9 489 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 AFF4Q9UHB7 1163 aaKnown RBP4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 TMEM59LQ9UK28 342 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 FBXW11Q9UKB1 542 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 HCFC2Q9Y5Z7 792 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 MTCL1Q9Y4B5 1905 aaKnown RBP4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 PTPRJQ12913 1337 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 PLXNA3P51805 1871 aa4.41□□□□□ -1.7
GAPVD1-216ENST00000474637 RANBP2P49792 3224 aaKnown RBP4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 GTPBP10A4D1E9 387 aaKnown RBP4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 FOXN3O00409 490 aaPredicted RBP4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 KRIT1O00522 736 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 EBAG9O00559 213 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 TBX10O75333 385 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ABLIM3O94929 683 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 VNN1O95497 513 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 HLA-DRAP01903 254 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 CPB1P15086 417 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 EPCAMP16422 314 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 RPL17P18621 184 aaKnown RBP4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ABCB4P21439 1286 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 KCNA5P22460 613 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 SOX5P35711 763 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 LTBRP36941 435 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ATP1A2P50993 1020 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 MYL6P60660 151 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 YWHAEP62258 255 aaKnown RBP4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 DLG4P78352 724 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 GPR17Q13304 367 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 NNTQ13423 1086 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 MAPRE1Q15691 268 aaKnown RBP4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 IFI16Q16666 785 aaKnown RBP4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ARHGAP44Q17R89 818 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 TJAP1Q5JTD0 557 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 PPM1LQ5SGD2 360 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 C1orf220Q5T0J3 134 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 CFAP58Q5T655 872 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 WSCD1Q658N2 575 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 PHLDB3Q6NSJ2 640 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 SV2AQ7L0J3 742 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 PALB2Q86YC2 1186 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ADGRF2Q8IZF7 708 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ELMOD1Q8N336 334 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 SMRP1Q8NCR6 262 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 GIMAP7Q8NHV1 300 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 SLC30A5Q8TAD4 765 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ACTRT1Q8TDG2 376 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ASB2Q96Q27 587 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ZCWPW1Q9H0M4 648 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 S1PR5Q9H228 398 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 ADAM7Q9H2U9 754 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 CYP3A43Q9HB55 503 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 AMACRQ9UHK6 382 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 CDH9Q9ULB4 789 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 BARX2Q9UMQ3 279 aaPredicted RBP4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 SNX9Q9Y5X1 595 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 FAM169AQ9Y6X4 670 aa4.4□□□□□ -1.7
GAPVD1-216ENST00000474637 SCN1AP35498 2009 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 GRXCR2A6NFK2 248 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 F8VZ95 297 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 MYO1FO00160 1098 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 CES2O00748 559 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 MBTPS2O43462 519 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 SHOX2O60902 331 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 CLSTN1O94985 981 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 FGF19O95750 216 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 CPP00450 1065 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 CST3P01034 146 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 ATF2P15336 505 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 FERP16591 822 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 TNFAIP3P21580 790 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 IGFBP6P24592 240 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 GNL1P36915 607 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 GCLMP48507 274 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 TUFMP49411 452 aaKnown RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 ARPP19P56211 112 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 GNGT1P63211 74 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 ROR1Q01973 937 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 PPARDQ03181 441 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 HLTFQ14527 1009 aaKnown RBP eCLIP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 SMAD2Q15796 467 aaKnown RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 NFE2Q16621 373 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 SOWAHAQ2M3V2 549 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 WDR72Q3MJ13 1102 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 ATAT1Q5SQI0 421 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 RARS2Q5T160 578 aaKnown RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 PTCRAQ6ISU1 281 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 SYCE2Q6PIF2 218 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 C4orf50Q6ZRC1 276 aa4.4□□□□□ -1.71
GAPVD1-216ENST00000474637 ADAT2Q7Z6V5 191 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms