RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 THPOP40225 353 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 PPP2R2AP63151 447 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 ARHGEF6Q15052 776 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 TAOK1Q7L7X3 1001 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 CCDC25Q86WR0 208 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 OR2W6PQ8NHA6 318 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 HSPH1Q92598 858 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 HAUS1Q96CS2 278 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 CALN1Q9BXU9 219 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 RCOR3Q9P2K3 495 aaPredicted RBP22.74■■□□□ 1.23
CCM2-206ENST00000474617 DDX20Q9UHI6 824 aaKnown RBP22.74■■□□□ 1.23
CCM2-206ENST00000474617 CDH9Q9ULB4 789 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.73■■□□□ 1.23
CCM2-206ENST00000474617 A0A0U1RQF3 1178 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 RASGRF2O14827 1237 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 INPPL1O15357 1258 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 ADORA2BP29275 332 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 MLH1P40692 756 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 DPYSL3Q14195 570 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 DSC3Q14574 896 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 ZSCAN26Q16670 478 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 KCNT1Q5JUK3 1230 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 CYP4V2Q6ZWL3 525 aaPredicted RBP22.73■■□□□ 1.23
CCM2-206ENST00000474617 SCUBE3Q8IX30 993 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 RIBC1Q8N443 379 aaPredicted RBP22.73■■□□□ 1.23
CCM2-206ENST00000474617 P3H4Q92791 437 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 KHSRPQ92945 711 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCM2-206ENST00000474617 FAF2Q96CS3 445 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 SENP8Q96LD8 212 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 RNF157Q96PX1 679 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 FRMD8Q9BZ67 464 aaPredicted RBP22.73■■□□□ 1.23
CCM2-206ENST00000474617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCM2-206ENST00000474617 CALCOCO1Q9P1Z2 691 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 NOD1Q9Y239 953 aa22.73■■□□□ 1.23
CCM2-206ENST00000474617 ARL5CA6NH57 179 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 CCDC130P13994 396 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 LMO2P25791 158 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 MDH1P40925 334 aaKnown RBP22.72■■□□□ 1.23
CCM2-206ENST00000474617 AIF1P55008 147 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 GRIK3Q13003 919 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 GPS1Q13098 491 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 STAT4Q14765 748 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 NOMO1Q15155 1222 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 TRIP13Q15645 432 aaPredicted RBP22.72■■□□□ 1.23
CCM2-206ENST00000474617 CYP4F22Q6NT55 531 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 TRNP1Q6NT89 227 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 SH2D3CQ8N5H7 860 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 GSTCDQ8NEC7 633 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 CFAP57Q96MR6 1250 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 PEBP4Q96S96 227 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 NGRNQ9NPE2 291 aaKnown RBP22.72■■□□□ 1.23
CCM2-206ENST00000474617 PADI3Q9ULW8 664 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 DAB1O75553 588 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 CTSHP09668 335 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 FAM200BP0CF97 657 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 ODC1P11926 461 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 TSHRP16473 764 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 MATKP42679 507 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 NR2C2P49116 596 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 EIF3EP60228 445 aaKnown RBP22.72■■□□□ 1.23
CCM2-206ENST00000474617 GNGT1P63211 74 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 CBLBQ13191 982 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 ITGA7Q13683 1181 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 DPYSL2Q16555 572 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 ERMARDQ5T6L9 678 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 CENPUQ71F23 418 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 PPIL6Q8IXY8 311 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 CENPTQ96BT3 561 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 ZFP42Q96MM3 310 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 ZIC5Q96T25 663 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 GAD1Q99259 594 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 ADAM7Q9H2U9 754 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 GOLGA2P5Q9HBQ8 144 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 TMEM51Q9NW97 253 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 RRN3Q9NYV6 651 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 STAP1Q9ULZ2 295 aa22.72■■□□□ 1.23
CCM2-206ENST00000474617 NOVA2Q9UNW9 492 aaKnown RBP22.72■■□□□ 1.23
CCM2-206ENST00000474617 TULP2O00295 520 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 APOL1O14791 398 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 ROR1Q01973 937 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 C15orf59Q2T9L4 293 aaPredicted RBP22.71■■□□□ 1.23
CCM2-206ENST00000474617 SLC25A52Q3SY17 297 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 TNFAIP8L3Q5GJ75 292 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 RNASEH2BQ5TBB1 312 aaKnown RBP22.71■■□□□ 1.23
CCM2-206ENST00000474617 SLC9A4Q6AI14 798 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 DSTYKQ6XUX3 929 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 PPP1R21Q6ZMI0 780 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 BZW1Q7L1Q6 419 aaKnown RBP22.71■■□□□ 1.23
CCM2-206ENST00000474617 OSTM1Q86WC4 334 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 METTL23Q86XA0 190 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 FUKQ8N0W3 1084 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 ACSF2Q96CM8 615 aaPredicted RBP22.71■■□□□ 1.23
CCM2-206ENST00000474617 RBM15Q96T37 977 aaKnown RBP eCLIP22.71■■□□□ 1.23
CCM2-206ENST00000474617 TRIM62Q9BVG3 475 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 LRRC4Q9HBW1 653 aa22.71■■□□□ 1.23
CCM2-206ENST00000474617 BCCIPQ9P287 314 aaKnown RBP eCLIP22.71■■□□□ 1.23
CCM2-206ENST00000474617 CYP11A1P05108 521 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 CCND3P30281 292 aaPredicted RBP22.7■■□□□ 1.22
CCM2-206ENST00000474617 PRMT2P55345 433 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 HDAC4P56524 1084 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms