RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 HECTD3Q5T447 861 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 ARHGAP17Q68EM7 881 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 IRF2BP1Q8IU81 584 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 UBR7Q8N806 425 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 OVCA2Q8WZ82 227 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 NELL2Q99435 816 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 OSBPL6Q9BZF3 934 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 NACA2Q9H009 215 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 LINC00597Q9H2U6 94 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 FBXO44Q9H4M3 255 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 LMAN1LQ9HAT1 526 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 COMMD8Q9NX08 183 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 CFAP97Q9P2B7 532 aa16.9■□□□□ 0.3
ITGB1-210ENST00000474568 NUP210Q8TEM1 1887 aaPredicted RBP16.9■□□□□ 0.3
ITGB1-210ENST00000474568 TULP2O00295 520 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 NCAM2O15394 837 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 OLFM2O95897 454 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 TBX18O95935 607 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 IRF1P10914 325 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 SLC7A9P82251 487 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 FZD5Q13467 585 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 PDGFRLQ15198 375 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 SGO2Q562F6 1265 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 NAIF1Q69YI7 327 aaPredicted RBP16.89■□□□□ 0.29
ITGB1-210ENST00000474568 TTC30AQ86WT1 665 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 C1orf210Q8IVY1 113 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 UBA3Q8TBC4 463 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 OSCP1Q8WVF1 389 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 NMUR1Q9HB89 426 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 DACH1Q9UI36 760 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 NUDT5Q9UKK9 219 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 TSPAN16Q9UKR8 245 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 TICRRQ7Z2Z1 1910 aa16.89■□□□□ 0.29
ITGB1-210ENST00000474568 OBSL1O75147 1896 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 COL4A2P08572 1712 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 A0A1W2PQH9 124 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 FAM92AA1XBS5 289 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 RNF225M0QZC1 329 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-210ENST00000474568 TLR5O60602 858 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 ZDHHC11BP0C7U3 371 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 PFKLP17858 780 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 APBA1Q02410 837 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 GJB7Q6PEY0 223 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 PIGZQ86VD9 579 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 RALGPS2Q86X27 583 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-210ENST00000474568 ZNF687Q8N1G0 1237 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 RBBP8NLQ8NC74 664 aaPredicted RBP16.88■□□□□ 0.29
ITGB1-210ENST00000474568 CLDN23Q96B33 292 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 KREMEN1Q96MU8 473 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 ECT2Q9H8V3 914 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 TLR8Q9NR97 1041 aaKnown RBP16.88■□□□□ 0.29
ITGB1-210ENST00000474568 OSER1Q9NX31 292 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 SCML2Q9UQR0 700 aa16.88■□□□□ 0.29
ITGB1-210ENST00000474568 MDM4O15151 490 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 LAMTOR5O43504 91 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 CHRNB1P11230 501 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 VDRP11473 427 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 KRT5P13647 590 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 SLC9A1P19634 815 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 BRD2P25440 801 aaKnown RBP16.87■□□□□ 0.29
ITGB1-210ENST00000474568 KIF11P52732 1056 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 PDE4CQ08493 712 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 MTAPQ13126 283 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 EML3Q32P44 896 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 ALYREFQ86V81 257 aaKnown RBP16.87■□□□□ 0.29
ITGB1-210ENST00000474568 CPA6Q8N4T0 437 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 ANKRD52Q8NB46 1076 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 TFAP2BQ92481 460 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 ATP2A3Q93084 1043 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 WBP2Q969T9 261 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 MSANTD3Q96H12 275 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 THAP9Q9H5L6 903 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 FAM124BQ9H5Z6 455 aaPredicted RBP16.87■□□□□ 0.29
ITGB1-210ENST00000474568 PNPLA8Q9NP80 782 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 UBE2TQ9NPD8 197 aaPredicted RBP16.87■□□□□ 0.29
ITGB1-210ENST00000474568 HESX1Q9UBX0 185 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 NAGPAQ9UK23 515 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 GREB1Q4ZG55 1949 aa16.87■□□□□ 0.29
ITGB1-210ENST00000474568 F5P12259 2224 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 O00370 1275 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 RARGP13631 454 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 TCF3P15923 654 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 ERCC5P28715 1186 aaPredicted RBP16.86■□□□□ 0.29
ITGB1-210ENST00000474568 GJA4P35212 333 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 BCAT1P54687 386 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 SLC8A3P57103 927 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 CSTF1Q05048 431 aaKnown RBP16.86■□□□□ 0.29
ITGB1-210ENST00000474568 SNX30Q5VWJ9 437 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 TSSK4Q6SA08 328 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 Q6ZS52 159 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 SCD5Q86SK9 330 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 NDRG1Q92597 394 aaKnown RBP16.86■□□□□ 0.29
ITGB1-210ENST00000474568 CHFRQ96EP1 664 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 ZFRQ96KR1 1074 aaKnown RBP16.86■□□□□ 0.29
ITGB1-210ENST00000474568 ZSWIM1Q9BR11 485 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 IRF2BPLQ9H1B7 796 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
ITGB1-210ENST00000474568 SH3BP1Q9Y3L3 701 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 DENND4CQ5VZ89 1909 aa16.86■□□□□ 0.29
ITGB1-210ENST00000474568 PES1O00541 588 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms