RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 WHAMMP3Q1A5X7 153 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 C8orf34Q49A92 452 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 WDR93Q6P2C0 686 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CYP4V2Q6ZWL3 525 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 R3HCC1LQ7Z5L2 792 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 DSG4Q86SJ6 1040 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 RETREG3Q86VR2 466 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 STX12Q86Y82 276 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CPOQ8IVL8 374 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PM20D2Q8IYS1 436 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 LINC00518Q8N0U6 118 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 TCAIMQ8N3R3 496 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 LIPHQ8WWY8 451 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 NANOS1Q8WY41 292 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 TAAR9Q96RI9 348 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 UHRF1Q96T88 793 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 FAM129BQ96TA1 746 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CARD9Q9H257 536 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 KCNK13Q9HB14 408 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 NUDT15Q9NV35 164 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 KCNN3Q9UGI6 736 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CPA4Q9UI42 421 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 MAD2L2Q9UI95 211 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 RPS6KA6Q9UK32 745 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 HCN2Q9UL51 889 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 SLC22A14Q9Y267 594 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PCDHGA3Q9Y5H0 932 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 A0A0J9YVX5 310 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 GPR89AB7ZAQ6 455 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 BTBD19C9JJ37 291 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 J3QW42 95 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 MYO1FO00160 1098 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 HNRNPRO43390 633 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 TOMM70O94826 608 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 HMOX1P09601 288 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 GPR89BP0CG08 455 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PYGMP11217 842 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PRIM2P49643 509 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 ERFP50548 548 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 COPS2P61201 443 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 RBP5P82980 135 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 AMPD2Q01433 879 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 C2orf54Q08AI8 447 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PEX6Q13608 980 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 STARD3Q14849 445 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 LLGL1Q15334 1064 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 FAM187BQ17R55 369 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 MAP3K21Q5TCX8 1036 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CYP4F22Q6NT55 531 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 SCYL2Q6P3W7 929 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 NSMFQ6X4W1 530 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PIK3AP1Q6ZUJ8 805 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 KCTD20Q7Z5Y7 419 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 FAM156AQ8NDB6 213 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CCDC112Q8NEF3 446 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 WFDC12Q8WWY7 111 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 WNT8BQ93098 351 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 ANKRD36BP1Q96IX9 119 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 TMEM74Q96NL1 305 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PRAM1Q96QH2 718 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 HEPHQ9BQS7 1158 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 SF3B5Q9BWJ5 86 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 TBC1D10AQ9BXI6 508 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 MIS12Q9H081 205 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 RIMS4Q9H426 269 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 SLC52A2Q9HAB3 445 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 WWOXQ9NZC7 414 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 MARK1Q9P0L2 795 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 STK17AQ9UEE5 414 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CD300AQ9UGN4 299 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CNOT7Q9UIV1 285 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 CAPN7Q9Y6W3 813 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 SENP3-EIF4A1A0A087X0R7 540 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 GOLGA8BA8MQT2 603 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 AHRRA9YTQ3 701 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 H0YAE9 185 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CXCL11O14625 94 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 SLC9A3R1O14745 358 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 PRDM1O75626 825 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 ARHGDIAP52565 204 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 UBE2HP62256 183 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 RPS26P62854 115 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 RHAGQ02094 409 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CYP2A13Q16696 494 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 TUSC1Q2TAM9 212 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 HFEQ30201 348 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PDCD4Q53EL6 469 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 HERC4Q5GLZ8 1057 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 USP37Q86T82 979 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 FJX1Q86VR8 437 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 TPRA1Q86W33 373 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CAMK1DQ8IU85 385 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 RHPN2Q8IUC4 686 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 RASEFQ8IZ41 740 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 LZTR1Q8N653 840 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 ZNF248Q8NDW4 579 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PPP1R35Q8TAP8 253 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 LMF1Q96S06 567 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 HEMGNQ9BXL5 484 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 EPB41L5Q9HCM4 733 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms