RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 HTRA2O43464 458 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 LPXNO60711 386 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 OPHN1O60890 802 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 HRGP04196 525 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 PFKMP08237 780 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 CLTBP09497 229 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 BRAFP15056 766 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 ACO1P21399 889 aaKnown RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 ECHS1P30084 290 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 ADSLP30566 484 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 SLC7A1P30825 629 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 KCNJ5P48544 419 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 GPR15P49685 360 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 POU5F1BQ06416 359 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 PPIL2Q13356 520 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 PPIGQ13427 754 aaKnown RBP eCLIP2.73□□□□□ -1.97
CALD1-216ENST00000473714 IL10RAQ13651 578 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 VGLL4Q14135 290 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 MYBPC3Q14896 1274 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 ADRM1Q16186 407 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 HLFQ16534 295 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 MAN2A1Q16706 1144 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 DGKDQ16760 1214 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 C3orf36Q3SXR2 165 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 AMOTQ4VCS5 1084 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 GJC2Q5T442 439 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 ZKSCAN2Q63HK3 967 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 CCDC70Q6NSX1 233 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 TRMT10BQ6PF06 316 aaKnown RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 PSRC1Q6PGN9 363 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 TOGARAM2Q6ZUX3 1019 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 RTN4RL1Q86UN2 441 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 ERO1BQ86YB8 467 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 FAM126BQ8IXS8 530 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 SPATA5Q8NB90 893 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 C3orf20Q8ND61 904 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 TTLL11Q8NHH1 800 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.73□□□□□ -1.97
CALD1-216ENST00000473714 CCHCR1Q8TD31 782 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 ZNF483Q8TF39 744 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 TSPEARQ8WU66 669 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 TRIB2Q92519 343 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 FOXRED1Q96CU9 486 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 DYDC2Q96IM9 177 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 RIPOR3Q96MK2 946 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 PARK7Q99497 189 aaKnown RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 MXD3Q9BW11 206 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 BTBD2Q9BX70 525 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 OR10A5Q9H207 317 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 BHMT2Q9H2M3 363 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 MANSC1Q9H8J5 431 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 PNPLA8Q9NP80 782 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 DMRT3Q9NQL9 472 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 RBM12Q9NTZ6 932 aaKnown RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 LMBRD1Q9NUN5 540 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 GNL3LQ9NVN8 582 aaKnown RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 SAE1Q9UBE0 346 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 MAGEL2Q9UJ55 1249 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 ANAPC4Q9UJX5 808 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 GJD2Q9UKL4 321 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 L1RE1Q9UN81 338 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 WASF3Q9UPY6 502 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 PCDHA3Q9Y5H8 950 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 SPTA1P02549 2419 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 IBTKQ9P2D0 1353 aaPredicted RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 KIF20BQ96Q89 1820 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 SALL1Q9NSC2 1324 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 A0A1B0GUL7 405 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 ABHD14A-ACY1A0A1B0GW23 586 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 FOXN3O00409 490 aaPredicted RBP2.72□□□□□ -1.97
CALD1-216ENST00000473714 SLC16A6O15403 523 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 CUTAO60888 179 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 PHF2O75151 1096 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 ENDOD1O94919 500 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 FSBPO95073 299 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 ARIH2O95376 493 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 CNOT4O95628 575 aaKnown RBP2.72□□□□□ -1.97
CALD1-216ENST00000473714 TIMP1P01033 207 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 KITP10721 976 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 PLA2G2AP14555 144 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 MYOGP15173 224 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 CD53P19397 219 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 CCND3P30281 292 aaPredicted RBP2.72□□□□□ -1.97
CALD1-216ENST00000473714 CHKAP35790 457 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 ADCY8P40145 1251 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 TECP42680 631 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 MCAMP43121 646 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 STT3AP46977 705 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 CCT5P48643 541 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 MAP2K6P52564 334 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 KRTAP10-7P60409 375 aaPredicted RBP2.72□□□□□ -1.97
CALD1-216ENST00000473714 CREMQ03060 361 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 TLE2Q04725 743 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 GRAPQ13588 217 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 SEMA5AQ13591 1074 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 MOGSQ13724 837 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 GALEQ14376 348 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 STARD3Q14849 445 aa2.72□□□□□ -1.97
CALD1-216ENST00000473714 POLD3Q15054 466 aaPredicted RBP2.72□□□□□ -1.97
CALD1-216ENST00000473714 ATP2B3Q16720 1220 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms