RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 FOXN3O00409 490 aaPredicted RBP13.86□□□□□ -0.19
TPM3-216ENST00000473036 TEX33O43247 280 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 LMNAP02545 664 aaKnown RBP13.86□□□□□ -0.19
TPM3-216ENST00000473036 PAEPP09466 180 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 VDRP11473 427 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 ANXA13P27216 316 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 CDC25CP30307 473 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 PDE4CQ08493 712 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 IFRD2Q12894 506 aaPredicted RBP13.86□□□□□ -0.19
TPM3-216ENST00000473036 TAF12Q16514 161 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 VITQ6UXI7 678 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 ARID3BQ8IVW6 561 aaPredicted RBP13.86□□□□□ -0.19
TPM3-216ENST00000473036 MAB21L3Q8N8X9 362 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 ANKRD52Q8NB46 1076 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 LSM14BQ9BX40 385 aaKnown RBP13.86□□□□□ -0.19
TPM3-216ENST00000473036 RNF38Q9H0F5 515 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 TASP1Q9H6P5 420 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 OSER1Q9NX31 292 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 CHORDC1Q9UHD1 332 aaPredicted RBP13.86□□□□□ -0.19
TPM3-216ENST00000473036 DNAJC12Q9UKB3 198 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
TPM3-216ENST00000473036 LGALS16A8MUM7 142 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 PES1O00541 588 aaKnown RBP13.85□□□□□ -0.19
TPM3-216ENST00000473036 ECI2O75521 394 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 FGF19O95750 216 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 ZDHHC11BP0C7U3 371 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 CD19P15391 556 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 CLCN1P35523 988 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 KIF11P52732 1056 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 YWHAEP62258 255 aaKnown RBP13.85□□□□□ -0.19
TPM3-216ENST00000473036 GRM2Q14416 872 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 SGO2Q562F6 1265 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 LCLAT1Q6UWP7 414 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 BHLHA9Q7RTU4 235 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 PIGZQ86VD9 579 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 SIX5Q8N196 739 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 ANKRD20A12PQ8NF67 263 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 NDRG1Q92597 394 aaKnown RBP13.85□□□□□ -0.19
TPM3-216ENST00000473036 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
TPM3-216ENST00000473036 ELSPBP1Q96BH3 223 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 NAP1L5Q96NT1 182 aaPredicted RBP13.85□□□□□ -0.19
TPM3-216ENST00000473036 NMUR1Q9HB89 426 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 GMIPQ9P107 970 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 CYTH4Q9UIA0 394 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.85□□□□□ -0.19
TPM3-216ENST00000473036 USP3Q9Y6I4 520 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 ATP8B3O60423 1300 aa13.85□□□□□ -0.19
TPM3-216ENST00000473036 TICRRQ7Z2Z1 1910 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 SHISA7A6NL88 538 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 HEPACAM2A8MVW5 462 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 CYP26A1O43174 497 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 KRT5P13647 590 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 UCHL3P15374 230 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 YWHAQP27348 245 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 WEE1P30291 646 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 MFAP3P55082 362 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 GPC5P78333 572 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 SYCP1Q15431 976 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 CNGA2Q16280 664 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 RAB41Q5JT25 222 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 MTSS1LQ765P7 747 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 ENOSF1Q7L5Y1 443 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 SCD5Q86SK9 330 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 FAM71AQ8IYT1 594 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 CMTM8Q8IZV2 173 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 ARL14EPQ8N8R7 260 aaPredicted RBP13.84□□□□□ -0.19
TPM3-216ENST00000473036 SLC35F5Q8WV83 523 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 SLITRK6Q9H5Y7 841 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 PLCB1Q9NQ66 1216 aa13.84□□□□□ -0.19
TPM3-216ENST00000473036 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
TPM3-216ENST00000473036 UXTQ9UBK9 157 aaPredicted RBP13.84□□□□□ -0.19
TPM3-216ENST00000473036 F5P12259 2224 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 ARNTLO00327 626 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 PI15O43692 258 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 RTN3O95197 1032 aaPredicted RBP13.83□□□□□ -0.2
TPM3-216ENST00000473036 OLFM2O95897 454 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 OAS1P00973 400 aaKnown RBP13.83□□□□□ -0.2
TPM3-216ENST00000473036 TPM2P07951 284 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 SRFP11831 508 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 CDK11BP21127 795 aaKnown RBP13.83□□□□□ -0.2
TPM3-216ENST00000473036 PUM1Q14671 1186 aaKnown RBP eCLIP13.83□□□□□ -0.22e-11■■■□□ 17.7
TPM3-216ENST00000473036 DRAP1Q14919 205 aaPredicted RBP13.83□□□□□ -0.2
TPM3-216ENST00000473036 SNX30Q5VWJ9 437 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 PMF1Q6P1K2 205 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 DENND1BQ6P3S1 775 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 SLC47A2Q86VL8 602 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 WDTC1Q8N5D0 677 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 ZNF606Q8WXB4 792 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 MRPS31Q92665 395 aaKnown RBP13.83□□□□□ -0.2
TPM3-216ENST00000473036 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.2
TPM3-216ENST00000473036 FBXO32Q969P5 355 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 WBP2Q969T9 261 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 ERGIC2Q96RQ1 377 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 UBXN6Q9BZV1 441 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 CCSER2Q9H7U1 834 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 ZFP14Q9HCL3 533 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 TRPC7Q9HCX4 862 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 PNPLA8Q9NP80 782 aa13.83□□□□□ -0.2
TPM3-216ENST00000473036 KIAA1257Q9ULG3 409 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms