RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SUSD6Q92537 303 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 JAKMIP2Q96AA8 810 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 SMARCD1Q96GM5 515 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 FAM81BQ96LP2 452 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 HEXIM2Q96MH2 286 aaKnown RBP9.64□□□□□ -0.87
SMC4-214ENST00000472991 DNAI2Q9GZS0 605 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
SMC4-214ENST00000472991 PLCB1Q9NQ66 1216 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 KRT82Q9NSB4 513 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 FAM207AQ9NSI2 230 aaPredicted RBP9.64□□□□□ -0.87
SMC4-214ENST00000472991 TMEM30AQ9NV96 361 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 HCFC1R1Q9NWW0 138 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 CEP72Q9P209 647 aa9.64□□□□□ -0.87
SMC4-214ENST00000472991 KIF26AQ9ULI4 1882 aaPredicted RBP9.64□□□□□ -0.87
SMC4-214ENST00000472991 CLUHO75153 1309 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 SLC35F4A4IF30 521 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 F8VP50 259 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 NOL4O94818 638 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 POU2F2P09086 479 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 IL9P15248 144 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 UCHL3P15374 230 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 RFX1P22670 979 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 GRIK1P39086 918 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 USP8P40818 1118 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 MTHFRP42898 656 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 ZNF132P52740 706 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 CACNA2D1P54289 1103 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 EPHB3P54753 998 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 UBASH3AP57075 661 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 POLR2FP61218 127 aaKnown RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 RPL10AP62906 217 aaKnown RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 NTHL1P78549 312 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 CBX2Q14781 532 aaPredicted RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 DRAP1Q14919 205 aaPredicted RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 VEPH1Q14D04 833 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 AAK1Q2M2I8 961 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 SGO2Q562F6 1265 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 ATAT1Q5SQI0 421 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 VSTM1Q6UX27 236 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 GRASPQ7Z6J2 395 aaPredicted RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 GAS2L3Q86XJ1 694 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 GPR161Q8N6U8 529 aaKnown RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 NEK11Q8NG66 645 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 RNF217Q8TC41 542 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 GPR152Q8TDT2 470 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 CYFIP2Q96F07 1278 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 RIPOR3Q96MK2 946 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 CORO1BQ9BR76 489 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 NAA15Q9BXJ9 866 aaKnown RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 POMKQ9H5K3 350 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 NLRC4Q9NPP4 1024 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 IFNKQ9P0W0 207 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 DNMT3BQ9UBC3 853 aaKnown RBP9.63□□□□□ -0.87
SMC4-214ENST00000472991 CNTN6Q9UQ52 1028 aa9.63□□□□□ -0.87
SMC4-214ENST00000472991 PAEPP09466 180 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 FAM200BP0CF97 657 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 VDRP11473 427 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 PTPN2P17706 415 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 SP100P23497 879 aaPredicted RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 ANXA13P27216 316 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 MRPS5P82675 430 aaKnown RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 IFRD2Q12894 506 aaPredicted RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 MTMR3Q13615 1198 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 NR1I3Q14994 352 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 SMAD2Q15796 467 aaKnown RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 TAF12Q16514 161 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 GOLGA7BQ2TAP0 167 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 PABPC1LQ4VXU2 614 aaKnown RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 ARHGAP17Q68EM7 881 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 CLEC20AQ6ZU45 233 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 GET4Q7L5D6 327 aaPredicted RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 ITIH5Q86UX2 942 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMC4-214ENST00000472991 ZMIZ2Q8NF64 920 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 ATXN2LQ8WWM7 1075 aaKnown RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 NANOS1Q8WY41 292 aaKnown RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 TFAP2BQ92481 460 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 PSMG2Q969U7 264 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 ZNF512Q96ME7 567 aaPredicted RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 NECTIN4Q96NY8 510 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 KCNK16Q96T55 309 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 HNRNPABQ99729 332 aaKnown RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 SMOQ99835 787 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 ZSWIM1Q9BR11 485 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 XPO4Q9C0E2 1151 aaKnown RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 GPR88Q9GZN0 384 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 RBSNQ9H1K0 784 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 ZNF334Q9HCZ1 680 aaPredicted RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 POLMQ9NP87 494 aaPredicted RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 DMAP1Q9NPF5 467 aaPredicted RBP9.62□□□□□ -0.87
SMC4-214ENST00000472991 ACP6Q9NPH0 428 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 ASAH2Q9NR71 780 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 TSPAN16Q9UKR8 245 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 FAM50BQ9Y247 325 aa9.62□□□□□ -0.87
SMC4-214ENST00000472991 NCOR1O75376 2440 aa9.61□□□□□ -0.87
SMC4-214ENST00000472991 A0A1W2PQC6 194 aa9.61□□□□□ -0.87
SMC4-214ENST00000472991 SLC38A8A6NNN8 435 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms