RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 SNX9Q9Y5X1 595 aa3.41□□□□□ -1.86
TTC3-214ENST00000472398 CLCA3PQ9Y6N3 262 aa3.41□□□□□ -1.86
TTC3-214ENST00000472398 CAPN7Q9Y6W3 813 aa3.41□□□□□ -1.86
TTC3-214ENST00000472398 GOLGA8JA6NMD2 632 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 SOBPA7XYQ1 873 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 H3BNC9 293 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 GOLGA8TH3BQL2 631 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 HAT1O14929 419 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 FOXP2O15409 715 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 EXOC3O60645 756 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 GGPS1O95749 300 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 GOLGA8HP0CJ92 632 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 GAAP10253 952 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 BCRP11274 1271 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 HOXD8P13378 290 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 MSNP26038 577 aaKnown RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 TECP42680 631 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 CBX5P45973 191 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 GCLCP48506 637 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 ZNF41P51814 821 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 PMS2P54278 862 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 NKX3-2P78367 333 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 KRT85P78386 507 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 ZNF543Q08ER8 600 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 RIPK1Q13546 671 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 CUL1Q13616 776 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 TRADDQ15628 312 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 SLC35G1Q2M3R5 365 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 SGO1Q5FBB7 561 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 ARSJQ5FYB0 599 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 TRAPPC3LQ5T215 181 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 FAM182BQ5T319 152 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 ACAD10Q6JQN1 1059 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 BORAQ6PGQ7 559 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 SV2BQ7L1I2 683 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 PLPPR4Q7Z2D5 763 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 TADA2BQ86TJ2 420 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 TMEM200AQ86VY9 491 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 C2CD5Q86YS7 1000 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 TUSC5Q8IXB3 177 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 NPAS3Q8IXF0 933 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 CNTROBQ8N137 903 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 IGSF22Q8N9C0 903 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 GLB1L3Q8NCI6 653 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 CNNM3Q8NE01 707 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 TRPC4APQ8TEL6 797 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 KLHL6Q8WZ60 621 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 ATP6V0A1Q93050 837 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 PHKBQ93100 1093 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 HDAC10Q969S8 669 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 ZNF837Q96EG3 531 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 C19orf60Q96EN9 201 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 TMEM169Q96HH4 297 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 ALS2CR12Q96Q35 445 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 ABHD1Q96SE0 405 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 CCT7Q99832 543 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 TBCDQ9BTW9 1192 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 KIFC3Q9BVG8 833 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 LRRC3Q9BY71 257 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 OXCT2Q9BYC2 517 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 H2AFY2Q9P0M6 372 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 ASH2LQ9UBL3 628 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 HESX1Q9UBX0 185 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 IPO11Q9UI26 975 aaKnown RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 ZNF215Q9UL58 517 aaPredicted RBP3.4□□□□□ -1.87
TTC3-214ENST00000472398 CAMK2AQ9UQM7 478 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 NPFFR2Q9Y5X5 522 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 TTC21AQ8NDW8 1320 aa3.4□□□□□ -1.87
TTC3-214ENST00000472398 A0A1B0GUL7 405 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TTC26A0AVF1 554 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 GOLGA8IPA6NC78 632 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 FAM86C2PA6NEL3 165 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 KPNA7A9QM74 516 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 TAF4O00268 1085 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 CCNT1O60563 726 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 PAGE1O75459 146 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 AFPP02771 609 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 CYP1A1P04798 512 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 GLI1P08151 1106 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 ACAA1P09110 424 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 SUPT20HL2P0C7V6 817 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TMIGD3P0DMS9 266 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 ACRP10323 421 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PCSK2P16519 638 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 BMI1P35226 326 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 SERPINF1P36955 418 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 NNMTP40261 264 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 NT5C2P49902 561 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 CLCNKAP51800 687 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PPP2R2AP63151 447 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TRAP1Q12931 704 aaKnown RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 STK4Q13043 487 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TRA2AQ13595 282 aaKnown RBP eCLIP3.39□□□□□ -1.872e-8■■□□□ 14.4
TTC3-214ENST00000472398 ACAP2Q15057 778 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 PTPAQ15257 358 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 TRIP4Q15650 581 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 TBCEQ15813 527 aaPredicted RBP3.39□□□□□ -1.87
TTC3-214ENST00000472398 INSCQ1MX18 579 aa3.39□□□□□ -1.87
TTC3-214ENST00000472398 SLC39A12Q504Y0 691 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms