RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 C4orf17Q53FE4 359 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 BLOC1S2Q6QNY1 142 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 USP49Q70CQ1 688 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 ADAT2Q7Z6V5 191 aaKnown RBP10.99□□□□□ -0.65
CDHR3-209ENST00000472116 LRRTM3Q86VH5 581 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 DDX42Q86XP3 938 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDHR3-209ENST00000472116 TERB1Q8NA31 727 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 OXER1Q8TDS5 423 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 SCFD1Q8WVM8 642 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 KCNE4Q8WWG9 221 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 IGSF8Q969P0 613 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
CDHR3-209ENST00000472116 MRGPRX1Q96LB2 322 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 PYM1Q9BRP8 204 aaKnown RBP10.99□□□□□ -0.65
CDHR3-209ENST00000472116 OCEL1Q9H607 264 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 POLD4Q9HCU8 107 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 BRMS1Q9HCU9 246 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 WSB2Q9NYS7 404 aaPredicted RBP10.99□□□□□ -0.65
CDHR3-209ENST00000472116 SNX11Q9Y5W9 270 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 UBR5O95071 2799 aaPredicted RBP10.98□□□□□ -0.65
CDHR3-209ENST00000472116 TTC26A0AVF1 554 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 METTL12A8MUP2 240 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 DFNA5O60443 496 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 TULP3O75386 442 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 SPATA31C1P0DKV0 1188 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 NPTX2P47972 431 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 CLDN6P56747 220 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 BNC1Q01954 994 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 NUMA1Q14980 2115 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 ZBTB6Q15916 424 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 KIF19Q2TAC6 998 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 LY6G5CQ5SRR4 150 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 RHBDF2Q6PJF5 856 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 SCN4BQ8IWT1 228 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 DHX40Q8IX18 779 aaKnown RBP10.98□□□□□ -0.65
CDHR3-209ENST00000472116 TMEM130Q8N3G9 435 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 NAT16Q8N8M0 369 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 LRRC15Q8TF66 581 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 ZBTB45Q96K62 511 aaPredicted RBP10.98□□□□□ -0.65
CDHR3-209ENST00000472116 CNDP2Q96KP4 475 aaKnown RBP10.98□□□□□ -0.65
CDHR3-209ENST00000472116 ZNF578Q96N58 590 aaPredicted RBP10.98□□□□□ -0.65
CDHR3-209ENST00000472116 ABCB6Q9NP58 842 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 CD93Q9NPY3 652 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 KCNK4Q9NYG8 393 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 EHD2Q9NZN4 543 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 TRPM5Q9NZQ8 1165 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 ANKRD6Q9Y2G4 727 aa10.98□□□□□ -0.65
CDHR3-209ENST00000472116 ABLIM1O14639 778 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 SCAMP3O14828 347 aaKnown RBP10.97□□□□□ -0.65
CDHR3-209ENST00000472116 PPEF2O14830 753 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 KLK10O43240 276 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 MED24O75448 989 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 ACADMP11310 421 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 CPA1P15085 419 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 GLDCP23378 1020 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 PDIA3P30101 505 aaKnown RBP10.97□□□□□ -0.65
CDHR3-209ENST00000472116 TAF6P49848 677 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 MYL7Q01449 175 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 SAFBQ15424 915 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDHR3-209ENST00000472116 ANO4Q32M45 955 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 SPATA1Q5VX52 437 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 C9orf57Q5W0N0 161 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 EGFLAMQ63HQ2 1017 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 HAUS3Q68CZ6 603 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 GRAMD4Q6IC98 578 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 METTL3Q86U44 580 aaKnown RBP10.97□□□□□ -0.65
CDHR3-209ENST00000472116 SPATA2LQ8IUW3 424 aaPredicted RBP10.97□□□□□ -0.65
CDHR3-209ENST00000472116 LSMEM2Q8N112 164 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 LEO1Q8WVC0 666 aaPredicted RBP10.97□□□□□ -0.65
CDHR3-209ENST00000472116 OTUB2Q96DC9 234 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 BICD1Q96G01 975 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 JAKMIP1Q96N16 626 aaKnown RBP10.97□□□□□ -0.65
CDHR3-209ENST00000472116 AIFM3Q96NN9 605 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 SLC6A17Q9H1V8 727 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 SMPD4Q9NXE4 827 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 CFAP97Q9P2B7 532 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 ARHGAP28Q9P2N2 729 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 CLCA2Q9UQC9 943 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 STARD13Q9Y3M8 1113 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 RAD54BQ9Y620 910 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 CPQQ9Y646 472 aa10.97□□□□□ -0.65
CDHR3-209ENST00000472116 LRRK2Q5S007 2527 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 SPTBN1Q01082 2364 aaKnown RBP10.96□□□□□ -0.65
CDHR3-209ENST00000472116 LACTBL1A8MY62 500 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 TERTO14746 1132 aaKnown RBP10.96□□□□□ -0.65
CDHR3-209ENST00000472116 ABL1P00519 1130 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 PYGBP11216 843 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 KRT10P13645 584 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 ABCB4P21439 1286 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 CYP2F1P24903 491 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 RPA1P27694 616 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 GRIA4P48058 902 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 SLC7A9P82251 487 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 IL9RQ01113 521 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 ORC1Q13415 861 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 UBAP2LQ14157 1087 aaKnown RBP10.96□□□□□ -0.65
CDHR3-209ENST00000472116 WSCD1Q658N2 575 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 FBXL19Q6PCT2 694 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 ZPBP2Q6X784 338 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 CD302Q8IX05 232 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms