RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ZSCAN26Q16670 478 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 KRTAP21-3Q3LHN1 58 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 ZNF394Q53GI3 561 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 DGKKQ5KSL6 1271 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 PPM1LQ5SGD2 360 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 ARHGAP40Q5TG30 622 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 NAIF1Q69YI7 327 aaPredicted RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 GLB1LQ6UWU2 654 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 NT5DC4Q86YG4 428 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 MCATQ8IVS2 390 aaKnown RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 NAXDQ8IW45 347 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 MRPL41Q8IXM3 137 aaKnown RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 ADGRF4Q8IZF3 695 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 SLC7A14Q8TBB6 771 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 SSH3Q8TE77 659 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 C17orf50Q8WW18 174 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 TMEM87BQ96K49 555 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 COX4I2Q96KJ9 171 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 MBOAT7Q96N66 472 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 ZNF396Q96N95 335 aaPredicted RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 NAP1L4Q99733 375 aaKnown RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 DUSP23Q9BVJ7 150 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 LRRC3Q9BY71 257 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 GPR62Q9BZJ7 368 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 SMARCAD1Q9H4L7 1026 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 CXorf56Q9H5V9 222 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 ZNF287Q9HBT7 754 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 VAT1LQ9HCJ6 419 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 ZFP14Q9HCL3 533 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 PCMTD2Q9NV79 361 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 MAP3K20Q9NYL2 800 aaKnown RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 GTSE1Q9NYZ3 720 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 KLHL42Q9P2K6 505 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 DKK3Q9UBP4 350 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 ADAMTS1Q9UHI8 967 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 DPP7Q9UHL4 492 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 NOL7Q9UMY1 257 aaKnown RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 APOBEC2Q9Y235 224 aaKnown RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 EXOC6BQ9Y2D4 811 aa4.82□□□□□ -1.64
LMNB1-205ENST00000472034 TMA7Q9Y2S6 64 aaKnown RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 MRPL11Q9Y3B7 192 aaKnown RBP4.82□□□□□ -1.64
LMNB1-205ENST00000472034 FRMPD4Q14CM0 1322 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 SALL3Q9BXA9 1300 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 SPG11Q96JI7 2443 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CSMD2Q7Z408 3487 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 hCG_2014768A0A024R1R8 64 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 TLDC2A0PJX2 215 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 MYBPHLA2RUH7 354 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 ANTXRLA6NF34 631 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 ZNF263O14978 683 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 GPAA1O43292 621 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CBFA2T3O75081 653 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 E2F6O75461 281 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CST3P01034 146 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 POMCP01189 267 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 ALDH2P05091 517 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 RPLP2P05387 115 aaKnown RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 HNRNPCP07910 306 aaKnown RBP eCLIP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 HNRNPA1P09651 372 aaKnown RBP eCLIP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 GJA1P17302 382 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 PSMC3P17980 439 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 GARTP22102 1010 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 SSTR4P31391 388 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 NTF4P34130 210 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 NOP2P46087 812 aaKnown RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CLCN3P51790 818 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 DGKEP52429 567 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 ATXN3P54252 364 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 GHRHRQ02643 423 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 TNK2Q07912 1038 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 MYO1EQ12965 1108 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 TRAF1Q13077 416 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 BIRC2Q13490 618 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 LRP8Q14114 963 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 TRIM29Q14134 588 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 SLBPQ14493 270 aaKnown RBP eCLIP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 PDCD2Q16342 344 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 MAPK6Q16659 721 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 GNPTABQ3T906 1256 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 SEZ6Q53EL9 994 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CCDC92Q53HC0 331 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CCDC157Q569K6 752 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 RTP2Q5QGT7 225 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 TMEM201Q5SNT2 666 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 LIN9Q5TKA1 542 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 EGFLAMQ63HQ2 1017 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 FSTL4Q6MZW2 842 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 LCA5Q86VQ0 697 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 SPACA3Q8IXA5 215 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 IFNL3Q8IZI9 196 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 REXO1Q8N1G1 1221 aaKnown RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 FAM184AQ8NB25 1140 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 FAM13CQ8NE31 585 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 RLN3Q8WXF3 142 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 SEPT1Q8WYJ6 367 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CCDC47Q96A33 483 aaKnown RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CHFRQ96EP1 664 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 MED8Q96G25 268 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 WBP1Q96G27 269 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 NAF1Q96HR8 494 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms