RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 GLOD4Q9HC38 313 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 LIMCH1Q9UPQ0 1083 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 DNM3Q9UQ16 869 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 PCDHGA2Q9Y5H1 932 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 PHLPP1O60346 1717 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 KDM5DQ9BY66 1539 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 MIA2Q96PC5 1412 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 SPAG9O60271 1321 aaKnown RBP3.3□□□□□ -1.88
CLIP4-209ENST00000471165 A1L4Q6 167 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 SPTLC2O15270 562 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 HOXB2P14652 356 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 GCLCP48506 637 aaPredicted RBP3.3□□□□□ -1.88
CLIP4-209ENST00000471165 SLC9C1Q4G0N8 1177 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 FAM76BQ5HYJ3 339 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLIP4-209ENST00000471165 OR2W6PQ8NHA6 318 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 IFI44Q8TCB0 444 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 SH3TC2Q8TF17 1288 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 KCNG2Q9UJ96 466 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 GABRQQ9UN88 632 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 ABCA6Q8N139 1617 aa3.3□□□□□ -1.88
CLIP4-209ENST00000471165 SYNMO15061 1565 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 REREQ9P2R6 1566 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 LRRC9Q6ZRR7 1453 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 BCL9LQ86UU0 1499 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 SNED1Q8TER0 1413 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 WASHC2CQ9Y4E1 1318 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 CTIFO43310 598 aaKnown RBP3.29□□□□□ -1.88
CLIP4-209ENST00000471165 LDLRP01130 860 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 DLDP09622 509 aaKnown RBP3.29□□□□□ -1.88
CLIP4-209ENST00000471165 TCF3P15923 654 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 ATF3P18847 181 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 IL6STP40189 918 aaPredicted RBP3.29□□□□□ -1.88
CLIP4-209ENST00000471165 ZNF280AP59817 542 aaPredicted RBP3.29□□□□□ -1.88
CLIP4-209ENST00000471165 ERVFC1-1P60608 527 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 B4GALNT1Q00973 533 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 HABP2Q14520 560 aaPredicted RBP3.29□□□□□ -1.88
CLIP4-209ENST00000471165 RTL10Q7L3V2 364 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 RSPH3Q86UC2 560 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 DPF2Q92785 391 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 LRRC59Q96AG4 307 aaKnown RBP3.29□□□□□ -1.88
CLIP4-209ENST00000471165 HES6Q96HZ4 224 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 CNPPD1Q9BV87 410 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 SERTAD3Q9UJW9 196 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 EID1Q9Y6B2 187 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 NHSL1Q5SYE7 1610 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 KDM5CP41229 1560 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 NWD1Q149M9 1564 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 UGGT1Q9NYU2 1555 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 ARHGAP5Q13017 1502 aa3.29□□□□□ -1.88
CLIP4-209ENST00000471165 EP400Q96L91 3159 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 POLR1AO95602 1720 aaPredicted RBP3.28□□□□□ -1.88
CLIP4-209ENST00000471165 CLTCQ00610 1675 aaKnown RBP3.28□□□□□ -1.88
CLIP4-209ENST00000471165 A0A1B0GUV1 79 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 A0A1W2PNU3 283 aaPredicted RBP3.28□□□□□ -1.88
CLIP4-209ENST00000471165 VEGFCP49767 419 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 P2RX3P56373 397 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 DSCR9P59020 149 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 PSMC1P62191 440 aaKnown RBP3.28□□□□□ -1.88
CLIP4-209ENST00000471165 PPATQ06203 517 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 ATP13A4Q4VNC1 1196 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 TOR2AQ5JU69 321 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 SFRP4Q6FHJ7 346 aaPredicted RBP3.28□□□□□ -1.88
CLIP4-209ENST00000471165 TMEM108Q6UXF1 575 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 RFX8Q6ZV50 586 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 BRINP3Q76B58 766 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 UBE2Q1Q7Z7E8 422 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 LRRTM3Q86VH5 581 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 PDSS2Q86YH6 399 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 ATG4AQ8WYN0 398 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 SPRY4Q9C004 299 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 EGLN1Q9GZT9 426 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 SSX2IPQ9Y2D8 614 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 PCDHGB1Q9Y5G3 927 aa3.28□□□□□ -1.88
CLIP4-209ENST00000471165 COL16A1Q07092 1604 aaPredicted RBP3.28□□□□□ -1.88
CLIP4-209ENST00000471165 RTEL1-TNFRSF6BF6WH68 1400 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 MROH2AA6NES4 1674 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 IQGAP1P46940 1657 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 ZNF785A8K8V0 405 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 KIF3BO15066 747 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 EPN2O95208 641 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 BAG4O95429 457 aaKnown RBP3.27□□□□□ -1.89
CLIP4-209ENST00000471165 ACAA1P09110 424 aaPredicted RBP3.27□□□□□ -1.89
CLIP4-209ENST00000471165 MLH1P40692 756 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 EGR4Q05215 589 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 SQSTM1Q13501 440 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 CNNM4Q6P4Q7 775 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 ZNF449Q6P9G9 518 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 COL23A1Q86Y22 540 aaPredicted RBP3.27□□□□□ -1.89
CLIP4-209ENST00000471165 CLRN3Q8NCR9 226 aa3.27□□□□□ -1.89
CLIP4-209ENST00000471165 WIPF2Q8TF74 440 aaPredicted RBP3.27□□□□□ -1.89
CLIP4-209ENST00000471165 SCAF11Q99590 1463 aaKnown RBP3.27□□□□□ -1.89
CLIP4-209ENST00000471165 DEPDC5O75140 1603 aa3.26□□□□□ -1.89
CLIP4-209ENST00000471165 ATP7AQ04656 1500 aa3.26□□□□□ -1.89
CLIP4-209ENST00000471165 MAP3K1Q13233 1512 aa3.26□□□□□ -1.89
CLIP4-209ENST00000471165 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.26□□□□□ -1.89
CLIP4-209ENST00000471165 NDUFB8O95169 186 aa3.26□□□□□ -1.89
CLIP4-209ENST00000471165 TBX6O95947 436 aaPredicted RBP3.26□□□□□ -1.89
CLIP4-209ENST00000471165 CHEK2O96017 543 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms