RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ANXA6P08133 673 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 SRGNP10124 158 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 CST5P28325 142 aaPredicted RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 NTSR1P30989 418 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 AP2B1P63010 937 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 ANKRD45Q5TZF3 282 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 CLEC9AQ6UXN8 241 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 DTX2Q86UW9 622 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 MOGAT3Q86VF5 341 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 C1orf210Q8IVY1 113 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 SLC44A2Q8IWA5 706 aaPredicted RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 SUGP1Q8IWZ8 645 aaKnown RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 B3GALNT2Q8NCR0 500 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 SLC30A5Q8TAD4 765 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 WDR60Q8WVS4 1066 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 ATG4AQ8WYN0 398 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 FUBP1Q96AE4 644 aaKnown RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 MYEOVQ96EZ4 313 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 CDK5RAP1Q96SZ6 601 aaKnown RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 C17orf80Q9BSJ5 609 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 DDX23Q9BUQ8 820 aaKnown RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 ZNF703Q9H7S9 590 aaPredicted RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 MLXIPQ9HAP2 919 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 TBCCD1Q9NVR7 557 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 ZNF69Q9UC07 566 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 SRP68Q9UHB9 627 aaKnown RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 TMEM200CA6NKL6 621 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 J3KTA2 159 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 FAM155BO75949 473 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 GYS1P13807 737 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 CD19P15391 556 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 PPP3CBP16298 524 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 RBL1P28749 1068 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 ADD2P35612 726 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 NXPH1P58417 271 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 TIRAPP58753 221 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 GUCY1B3Q02153 619 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 ITIH3Q06033 890 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 SCAPQ12770 1279 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 TIGD2Q4W5G0 525 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 FBXO47Q5MNV8 452 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 SLC9A4Q6AI14 798 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 RINT1Q6NUQ1 792 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 LVRNQ6Q4G3 990 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 RAB11FIP4Q86YS3 637 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 FTSJ3Q8IY81 847 aaKnown RBP4.68□□□□□ -1.66
PRPF3-204ENST00000470824 FSTL5Q8N475 847 aaPredicted RBP4.68□□□□□ -1.66
PRPF3-204ENST00000470824 TEX19Q8NA77 164 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 OR1N1Q8NGS0 311 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 IL17DQ8TAD2 202 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 SUN3Q8TAQ9 357 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 SPPL3Q8TCT6 385 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 SLC25A43Q8WUT9 341 aaPredicted RBP4.68□□□□□ -1.66
PRPF3-204ENST00000470824 EXTL1Q92935 676 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 USP13Q92995 863 aaPredicted RBP4.68□□□□□ -1.66
PRPF3-204ENST00000470824 PTCD3Q96EY7 689 aaKnown RBP4.68□□□□□ -1.66
PRPF3-204ENST00000470824 C8orf49Q96NF6 230 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 ADAM2Q99965 735 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 VN1R3Q9BXE9 311 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 GLOD4Q9HC38 313 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 SEPSECSQ9HD40 501 aaKnown RBP4.68□□□□□ -1.66
PRPF3-204ENST00000470824 PRDM8Q9NQV8 689 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 CEP72Q9P209 647 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 DKK2Q9UBU2 259 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 LPAR3Q9UBY5 353 aa4.68□□□□□ -1.66
PRPF3-204ENST00000470824 COL15A1P39059 1388 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 ZAR1LA6NP61 321 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 AGPSO00116 658 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 PSMD9O00233 223 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 PLSCR1O15162 318 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 NCAM2O15394 837 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 SLC16A3O15427 465 aaKnown RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 SPDEFO95238 335 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 LMNAP02545 664 aaKnown RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 PYGLP06737 847 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 ZEB1P37275 1124 aaPredicted RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 HNRNPMP52272 730 aaKnown RBP eCLIP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 ATXN1P54253 815 aaKnown RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 PNLIPRP1P54315 467 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 SLC25A3Q00325 362 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 SP2Q02086 613 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 CSHL1Q14406 222 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 CLCA4Q14CN2 919 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 R3HDM1Q15032 1099 aaKnown RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 SF3B3Q15393 1217 aaKnown RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 LY6KQ17RY6 165 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 USP39Q53GS9 565 aaKnown RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 TEDDM1Q5T9Z0 273 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 RAB11FIP2Q7L804 512 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 SYNE4Q8N205 404 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 OR6Y1Q8NGX8 325 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 SCAMP5Q8TAC9 235 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 CXorf38Q8TB03 319 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 DVL3Q92997 716 aaPredicted RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 SDCCAG3Q96C92 435 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 TRAPPC9Q96Q05 1148 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 PYM1Q9BRP8 204 aaKnown RBP4.67□□□□□ -1.66
PRPF3-204ENST00000470824 KRTAP4-5Q9BYR2 181 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 BRD8Q9H0E9 1235 aa4.67□□□□□ -1.66
PRPF3-204ENST00000470824 TAF1DQ9H5J8 278 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms