RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CYP11B1P15538 503 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 PCSK2P16519 638 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ACO1P21399 889 aaKnown RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 GNA15P30679 374 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 MAGEA1P43355 309 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 SCNN1GP51170 649 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 VAV2P52735 878 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ZNF132P52740 706 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 LILRA4P59901 499 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 CDR2Q01850 454 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 RNASELQ05823 741 aaKnown RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 NAB2Q15742 525 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 IFI16Q16666 785 aaKnown RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ASTE1Q2TB18 679 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 E4F1Q66K89 784 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 SPOPLQ6IQ16 392 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ALKBH5Q6P6C2 394 aaKnown RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ELMSAN1Q6PJG2 1045 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 DCLRE1AQ6PJP8 1040 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 TMEM270Q6UE05 265 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ZNF571Q7Z3V5 609 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 RTN4RL1Q86UN2 441 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 TOP6BLQ8N6T0 577 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 UBR7Q8N806 425 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 MSANTD4Q8NCY6 345 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 GSTCDQ8NEC7 633 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 APPL2Q8NEU8 664 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 PHOSPHO2Q8TCD6 241 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 LINC01599Q8WXQ3 324 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ARNTL2Q8WYA1 636 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 KAT5Q92993 513 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 LPPQ93052 612 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 C18orf25Q96B23 403 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 TNIP3Q96KP6 325 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 NSUN5Q96P11 429 aaKnown RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 MMS19Q96T76 1030 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 NT5C1AQ9BXI3 368 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 OSBPL7Q9BZF2 842 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ZNF518BQ9C0D4 1074 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 PDCL3Q9H2J4 239 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 SPTLC3Q9NUV7 552 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 NOP53Q9NZM5 478 aaKnown RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 ADAMTS1Q9UHI8 967 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 AJAP1Q9UKB5 411 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-202ENST00000470357 POLIQ9UNA4 740 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 INPP5FQ9Y2H2 1132 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 PCDHA13Q9Y5I0 950 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 SNX9Q9Y5X1 595 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 CFAP54Q96N23 3096 aa7.04□□□□□ -1.28
VAMP3-202ENST00000470357 A0A087X0T9 212 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 KRBA1A5PL33 1030 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 BTNL10A8MVZ5 291 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 TMEM189-UBE2V1I3L0A0 370 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 THAP12O43422 761 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 KIF5CO60282 957 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 RTN2O75298 545 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 CILPO75339 1184 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 PLEKP08567 350 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 H2AFZP0C0S5 128 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 WEE2P0C1S8 567 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 FAM228BP0C875 321 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 VDRP11473 427 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 ODC1P11926 461 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 NID1P14543 1247 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 CD58P19256 250 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 WARSP23381 471 aaKnown RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 LHX1P48742 406 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 AARSP49588 968 aaKnown RBP eCLIP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 AFF1P51825 1210 aaKnown RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 GUCY2FP51841 1108 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 SNX16P57768 344 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 DSC1Q08554 894 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 ELAVL2Q12926 359 aaKnown RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 MTF1Q14872 753 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 GPNMBQ14956 572 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 PTPN14Q15678 1187 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 UPP1Q16831 310 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 CCDC122Q5T0U0 273 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 DSTYKQ6XUX3 929 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 SCARA5Q6ZMJ2 495 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 TOGARAM2Q6ZUX3 1019 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 H2AFVQ71UI9 128 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 LIMS2Q7Z4I7 341 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 DEFB128Q7Z7B8 93 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 SLC47A2Q86VL8 602 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 METTL23Q86XA0 190 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 GLYCTKQ8IVS8 523 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 HERC6Q8IVU3 1022 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 GJD3Q8N144 294 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 LRRC43Q8N309 656 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 RNF10Q8N5U6 811 aaKnown RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 TTC16Q8NEE8 873 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 OR13H1Q8NG92 308 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 SLC30A5Q8TAD4 765 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 CTNNBL1Q8WYA6 563 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 FAM84AQ96KN4 292 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 PPP1R13BQ96KQ4 1090 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 NOX5Q96PH1 765 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms