RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 RALGPS2Q86X27 583 aaPredicted RBP14.94□□□□□ -0.02
TOP3B-215ENST00000470338 ARHGEF19Q8IW93 802 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 PPM1KQ8N3J5 372 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 KIAA1958Q8N8K9 716 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 ANKRD52Q8NB46 1076 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 SH3RF2Q8TEC5 729 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 FAM3CQ92520 227 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 KAT5Q92993 513 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 INTS2Q9H0H0 1204 aaKnown RBP14.94□□□□□ -0.02
TOP3B-215ENST00000470338 IRF2BPLQ9H1B7 796 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 HPS4Q9NQG7 708 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 GMIPQ9P107 970 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 USP3Q9Y6I4 520 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 SPECC1L-ADORA2AF8WAN1 911 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 RNF225M0QZC1 329 aaPredicted RBP14.93□□□□□ -0.02
TOP3B-215ENST00000470338 MBD3O95983 291 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 PAEPP09466 180 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 VDRP11473 427 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 CTHP32929 405 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 MAGEA9P43362 315 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 RPS9P46781 194 aaKnown RBP14.93□□□□□ -0.02
TOP3B-215ENST00000470338 SOX9P48436 509 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 PGFP49763 221 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 KPNA1P52294 538 aaPredicted RBP14.93□□□□□ -0.02
TOP3B-215ENST00000470338 PDGFRLQ15198 375 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 SGO2Q562F6 1265 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 HECTD3Q5T447 861 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 TRIM68Q6AZZ1 485 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 TMEM270Q6UE05 265 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 RRAGAQ7L523 313 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 CREBRFQ8IUR6 639 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 TTC8Q8TAM2 541 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 OSCP1Q8WVF1 389 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 JAKMIP2Q96AA8 810 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 FAM122AQ96E09 287 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 EBF3Q9H4W6 596 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 TLR8Q9NR97 1041 aaKnown RBP14.93□□□□□ -0.02
TOP3B-215ENST00000470338 PCDHB4Q9Y5E5 795 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 CPQQ9Y646 472 aa14.93□□□□□ -0.02
TOP3B-215ENST00000470338 FANCMQ8IYD8 2048 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 GTPBP10A4D1E9 387 aaKnown RBP14.92□□□□□ -0.02
TOP3B-215ENST00000470338 OTOL1A6NHN0 477 aaPredicted RBP14.92□□□□□ -0.02
TOP3B-215ENST00000470338 H0Y858 1186 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 LEFTY2O00292 366 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 COCHO43405 550 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 MTIF2P46199 727 aaKnown RBP14.92□□□□□ -0.02
TOP3B-215ENST00000470338 EML3Q32P44 896 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 RAB41Q5JT25 222 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 TXNDC11Q6PKC3 985 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 CCDC186Q7Z3E2 898 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 TTC30AQ86WT1 665 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 FAM114A1Q8IWE2 563 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 KREMEN1Q96MU8 473 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 CCSER2Q9H7U1 834 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 DUS2Q9NX74 493 aaKnown RBP14.92□□□□□ -0.02
TOP3B-215ENST00000470338 TSPAN16Q9UKR8 245 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 NDRG2Q9UN36 371 aaKnown RBP14.92□□□□□ -0.02
TOP3B-215ENST00000470338 CNTN6Q9UQ52 1028 aa14.92□□□□□ -0.02
TOP3B-215ENST00000470338 ATG2BQ96BY7 2078 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 O00370 1275 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 CYP26A1O43174 497 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 MBL2P11226 248 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-215ENST00000470338 CHRNB1P11230 501 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 ARSAP15289 507 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 CD19P15391 556 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 SLC9A1P19634 815 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 ZNF132P52740 706 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 SLC8A3P57103 927 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 ANGPT1Q15389 498 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 MAN2A1Q16706 1144 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 GOLGA7BQ2TAP0 167 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 PKDCCQ504Y2 493 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 TRIM65Q6PJ69 517 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 LCLAT1Q6UWP7 414 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 GBP6Q6ZN66 633 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 PIGZQ86VD9 579 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 DDX42Q86XP3 938 aaKnown RBP eCLIP14.91□□□□□ -0.02
TOP3B-215ENST00000470338 C1orf210Q8IVY1 113 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 ZNF276Q8N554 614 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 ENOX1Q8TC92 643 aaKnown RBP14.91□□□□□ -0.02
TOP3B-215ENST00000470338 TFAP2BQ92481 460 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 CHFRQ96EP1 664 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 ZFRQ96KR1 1074 aaKnown RBP14.91□□□□□ -0.02
TOP3B-215ENST00000470338 ZSWIM1Q9BR11 485 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 CRACR2AQ9BSW2 395 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 LINC00597Q9H2U6 94 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 ECT2Q9H8V3 914 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 UBE2TQ9NPD8 197 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-215ENST00000470338 CYLDQ9NQC7 956 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 OSER1Q9NX31 292 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
TOP3B-215ENST00000470338 XPO1O14980 1071 aaKnown RBP14.9□□□□□ -0.02
TOP3B-215ENST00000470338 TLR5O60602 858 aa14.9□□□□□ -0.02
TOP3B-215ENST00000470338 IFNAR2P48551 515 aa14.9□□□□□ -0.02
TOP3B-215ENST00000470338 PSEN1P49768 467 aa14.9□□□□□ -0.02
TOP3B-215ENST00000470338 BCAT1P54687 386 aa14.9□□□□□ -0.02
TOP3B-215ENST00000470338 PDE4CQ08493 712 aa14.9□□□□□ -0.02
TOP3B-215ENST00000470338 BST2Q10589 180 aaKnown RBP14.9□□□□□ -0.02
TOP3B-215ENST00000470338 STILQ15468 1287 aa14.9□□□□□ -0.02
TOP3B-215ENST00000470338 CNGA2Q16280 664 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms