RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 TRIM64BA6NI03 449 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TNFRSF10AO00220 468 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 PSMD12O00232 456 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 EDIL3O43854 480 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 SNNO75324 88 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TBCAO75347 108 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TRPA1O75762 1119 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 RALAP11233 206 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 GLRA2P23416 452 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 JAK1P23458 1154 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 L1CAMP32004 1257 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 BST1Q10588 318 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TRPC3Q13507 836 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 UBAP2LQ14157 1087 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 CYTH1Q15438 398 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 CBWD6Q4V339 395 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 CBWD3Q5JTY5 395 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 CBWD5Q5RIA9 395 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ITPRIPL1Q6GPH6 555 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 NANOGP8Q6NSW7 305 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 SH2D5Q6ZV89 423 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ZNF354CQ86Y25 554 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 CPNE8Q86YQ8 564 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 LRRC49Q8IUZ0 686 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 KSR1Q8IVT5 923 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 KATNAL2Q8IYT4 538 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 LMO3Q8TAP4 145 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 C12orf43Q96C57 262 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 RMND5BQ96G75 393 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 REEP2Q9BRK0 252 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TRIM56Q9BRZ2 755 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 HERPUD2Q9BSE4 406 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 DHX33Q9H6R0 707 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 LIN28AQ9H9Z2 209 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 PCDH9Q9HC56 1237 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TMEM9Q9P0T7 183 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 STK39Q9UEW8 545 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 CDK5RAP2Q96SN8 1893 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 LOXHD1Q8IVV2 1947 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 CFAP99D6REC4 459 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 E7ESA3 106 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 GOLGA8RI6L899 631 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 COPEO14579 308 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 CLIC2O15247 247 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 TGFB1I1O43294 461 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 LIASO43766 372 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 SPAG6O75602 509 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 GCNT3O95395 438 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 STAMBPO95630 424 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 PROCP04070 461 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 FDX1P10109 184 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 ITGAXP20702 1163 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 HOXD11P31277 338 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 ARSEP51690 589 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 ATP6V0D1P61421 351 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 PTK7Q13308 1070 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 ATP1A4Q13733 1029 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 TFDP1Q14186 410 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 SPCS2Q15005 226 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 RALGPS1Q5JS13 557 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 HP1BP3Q5SSJ5 553 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 C6orf52Q5T4I8 152 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 C6orf183Q5T699 404 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 EGFLAMQ63HQ2 1017 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 STXBP4Q6ZWJ1 553 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 WDR75Q8IWA0 830 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 PDPRQ8NCN5 879 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 EXD1Q8NHP7 514 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 CCDC124Q96CT7 223 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 MRRFQ96E11 262 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 ZNF641Q96N77 438 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 TMEM47Q9BQJ4 181 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 FERMT1Q9BQL6 677 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 RTFDC1Q9BY42 306 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 PSTPIP2Q9H939 334 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 ANAPC7Q9UJX3 599 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 VPS28Q9UK41 221 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 PCDHGB4Q9UN71 923 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 ARHGAP26Q9UNA1 814 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 PCDHGB5Q9Y5G0 923 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 IKBKGQ9Y6K9 419 aa9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-207ENST00000469334 A0A0B4J269 797 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 UGT1A9O60656 530 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 UGT1A6P19224 532 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 UGT1A1P22309 533 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 UGT1A4P22310 534 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 UGT1A3P35503 534 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 UGT1A5P35504 534 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 YWHAGP61981 247 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 GPS1Q13098 491 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 TUBB3Q13509 450 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 PDE1CQ14123 709 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 NR1D2Q14995 579 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 TRIM16LQ309B1 348 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 ACAD10Q6JQN1 1059 aa9.35□□□□□ -0.91
SMARCE1-207ENST00000469334 ZNF746Q6NUN9 644 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms