RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 SEC24AO95486 1093 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 ZBED1O96006 694 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 CNPP09543 421 aaKnown RBP13.47□□□□□ -0.25
RUNX1-213ENST00000469087 ATF2P15336 505 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 SCNN1AP37088 669 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 DAOAP59103 153 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 RAB33AQ14088 237 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 MGAT5BQ3V5L5 792 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 EFHC1Q5JVL4 640 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 BHLHA9Q7RTU4 235 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 ARFGAP1Q8N6T3 406 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 GPR152Q8TDT2 470 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 FNIP1Q8TF40 1166 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 POF1BQ8WVV4 589 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 RXFP2Q8WXD0 754 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 CD101Q93033 1021 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 PSMB7Q99436 277 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 SEPT5Q99719 369 aaPredicted RBP13.47□□□□□ -0.25
RUNX1-213ENST00000469087 AFF4Q9UHB7 1163 aaKnown RBP13.47□□□□□ -0.25
RUNX1-213ENST00000469087 LZTS1Q9Y250 596 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 SAR1BQ9Y6B6 198 aa13.47□□□□□ -0.25
RUNX1-213ENST00000469087 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.46□□□□□ -0.25
RUNX1-213ENST00000469087 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.46□□□□□ -0.25
RUNX1-213ENST00000469087 YJEFN3A6XGL0 299 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 E7ENQ6 273 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 TRIM66O15016 1216 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 FBXO21O94952 628 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 PDGFRAP16234 1089 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 PRLRP16471 622 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 PSMA2P25787 234 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 CXCR5P32302 372 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 SLC1A1P43005 524 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 DNA2P51530 1060 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 SLC5A3P53794 718 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 YWHAZP63104 245 aaKnown RBP13.46□□□□□ -0.25
RUNX1-213ENST00000469087 CAMK1Q14012 370 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 PIGHQ14442 188 aaPredicted RBP13.46□□□□□ -0.25
RUNX1-213ENST00000469087 CCDC14Q49A88 953 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 SH3PXD2AQ5TCZ1 1133 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 TPGS2Q68CL5 300 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 HFE2Q6ZVN8 426 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 NIPA2Q8N8Q9 360 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 PBX4Q9BYU1 374 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.46□□□□□ -0.25
RUNX1-213ENST00000469087 SNX12Q9UMY4 172 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 USTQ9Y2C2 406 aa13.46□□□□□ -0.25
RUNX1-213ENST00000469087 PATJQ8NI35 1801 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 ZNF185O15231 689 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 GRM6O15303 877 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 DDX3YO15523 660 aaKnown RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 SPOPO43791 374 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 FYNP06241 537 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 RB1P06400 928 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 TCF4P15884 667 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 GPD1P21695 349 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 CA8P35219 290 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 ZNF143P52747 638 aaPredicted RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 IFRD2Q12894 506 aaPredicted RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 RAB6CQ53S08 254 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 ARCQ7LC44 396 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 NUP93Q8N1F7 819 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 SCML4Q8N228 414 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 COG1Q8WTW3 980 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 KRT35Q92764 455 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 FAM149B1Q96BN6 582 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 TGS1Q96RS0 853 aaKnown RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 OSBPL9Q96SU4 736 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 TCF25Q9BQ70 676 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 RAB6CQ9H0N0 254 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 SSX2IPQ9Y2D8 614 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 IRAK3Q9Y616 596 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 HIDE1A8MVS5 230 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 CSPG5O95196 566 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 ATF6P18850 670 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 TFE3P19532 575 aaPredicted RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 MAN1A1P33908 653 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 TUFMP49411 452 aaKnown RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 PGFP49763 221 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 PEX5P50542 639 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 TAS2R40P59535 323 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 ERVK-21P61565 698 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 USP46P62068 366 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 C15orf59Q2T9L4 293 aaPredicted RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 SYPL2Q5VXT5 272 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 DEFB106AQ8N104 65 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
RUNX1-213ENST00000469087 ALG3Q92685 438 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 SPATA17Q96L03 361 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 ADAM33Q9BZ11 813 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 ASNSD1Q9NWL6 643 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 IL37Q9NZH6 218 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 LCMT1Q9UIC8 334 aa13.45□□□□□ -0.26
RUNX1-213ENST00000469087 LAMA3Q16787 3333 aa13.44□□□□□ -0.26
RUNX1-213ENST00000469087 GREB1Q4ZG55 1949 aa13.44□□□□□ -0.26
RUNX1-213ENST00000469087 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
RUNX1-213ENST00000469087 C2orf71A6NGG8 1288 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms