RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 PCDHB4Q9Y5E5 795 aa13.73□□□□□ -0.21
CLRN1-204ENST00000468836 ARSAP15289 507 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 TCF3P15923 654 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 MTIF2P46199 727 aaKnown RBP13.72□□□□□ -0.21
CLRN1-204ENST00000468836 TUBP50607 506 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 RAD23BP54727 409 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 CSTF1Q05048 431 aaKnown RBP13.72□□□□□ -0.21
CLRN1-204ENST00000468836 GOLGA7BQ2TAP0 167 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 TADA2BQ86TJ2 420 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 FAM114A1Q8IWE2 563 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 TRIM59Q8IWR1 403 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 SLC4A11Q8NBS3 891 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 ZMIZ2Q8NF64 920 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 CNOT6LQ96LI5 555 aaKnown RBP13.72□□□□□ -0.21
CLRN1-204ENST00000468836 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
CLRN1-204ENST00000468836 DUSP16Q9BY84 665 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 CHRDQ9H2X0 955 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 ECT2Q9H8V3 914 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 CFAP97Q9P2B7 532 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 FBXO4Q9UKT5 387 aa13.72□□□□□ -0.21
CLRN1-204ENST00000468836 ZDBF2Q9HCK1 2354 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 PMM2O15305 246 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 CYP26A1O43174 497 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 COCHO43405 550 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 TLR5O60602 858 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 OLFM2O95897 454 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 IRF1P10914 325 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 RALAP11233 206 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 CCR3P51677 355 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 BCAT1P54687 386 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 MARSP56192 900 aaKnown RBP13.71□□□□□ -0.21
CLRN1-204ENST00000468836 ARHGAP17Q68EM7 881 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 TXNDC11Q6PKC3 985 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 RIN3Q8TB24 985 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 NKD2Q969F2 451 aaPredicted RBP13.71□□□□□ -0.21
CLRN1-204ENST00000468836 PHOX2BQ99453 314 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 RNF38Q9H0F5 515 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 INTS2Q9H0H0 1204 aaKnown RBP13.71□□□□□ -0.21
CLRN1-204ENST00000468836 CCSER2Q9H7U1 834 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 TBC1D14Q9P2M4 693 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 NAGPAQ9UK23 515 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 LSM7Q9UK45 103 aaKnown RBP13.71□□□□□ -0.21
CLRN1-204ENST00000468836 SCML2Q9UQR0 700 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 COL4A3Q01955 1670 aa13.71□□□□□ -0.21
CLRN1-204ENST00000468836 NUP210Q8TEM1 1887 aaPredicted RBP13.71□□□□□ -0.21
CLRN1-204ENST00000468836 ZNF318Q5VUA4 2279 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 FAM92AA1XBS5 289 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 SP9P0CG40 484 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 CHRNB1P11230 501 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 VDRP11473 427 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 GJA4P35212 333 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 NBL1P41271 181 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 PSEN1P49768 467 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 MTAPQ13126 283 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 EML3Q32P44 896 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 SNX30Q5VWJ9 437 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 RRAGAQ7L523 313 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 GPRIN1Q7Z2K8 1008 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 ARHGAP18Q8N392 663 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 ANKRD52Q8NB46 1076 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 EHBP1Q8NDI1 1231 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
CLRN1-204ENST00000468836 P2RY13Q9BPV8 354 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 LRRC4Q9HBW1 653 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 RBM12Q9NTZ6 932 aaKnown RBP13.7□□□□□ -0.22
CLRN1-204ENST00000468836 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 IL37Q9NZH6 218 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 TSPAN16Q9UKR8 245 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 KIAA1257Q9ULG3 409 aa13.7□□□□□ -0.22
CLRN1-204ENST00000468836 E2F8A0AVK6 867 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 SHISA7A6NL88 538 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
CLRN1-204ENST00000468836 SCAMP3O14828 347 aaKnown RBP13.69□□□□□ -0.22
CLRN1-204ENST00000468836 GFRA3O60609 400 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 ADH1CP00326 375 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 PAEPP09466 180 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 SETSIPP0DME0 302 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 RARGP13631 454 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 KRT5P13647 590 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 ATP5C1P36542 298 aaKnown RBP13.69□□□□□ -0.22
CLRN1-204ENST00000468836 CXCL12P48061 93 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 KIF11P52732 1056 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 NRLP54845 237 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 GCNT1Q02742 428 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 C1QBPQ07021 282 aaKnown RBP13.69□□□□□ -0.22
CLRN1-204ENST00000468836 BST2Q10589 180 aaKnown RBP13.69□□□□□ -0.22
CLRN1-204ENST00000468836 STILQ15468 1287 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 DPCR1Q3MIW9 517 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 C10orf120Q5SQS8 335 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 GBP6Q6ZN66 633 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 RSRC2Q7L4I2 434 aaKnown RBP13.69□□□□□ -0.22
CLRN1-204ENST00000468836 SIX6OS1Q8N1H7 587 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 SYNPOQ8N3V7 929 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 KIAA1958Q8N8K9 716 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 RBBP8NLQ8NC74 664 aaPredicted RBP13.69□□□□□ -0.22
CLRN1-204ENST00000468836 CCDC26Q8TAB7 109 aa13.69□□□□□ -0.22
CLRN1-204ENST00000468836 ATRIPQ8WXE1 791 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms