RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 FAM172AQ8WUF8 416 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 HNRNPLLQ8WVV9 542 aaKnown RBP19.87■□□□□ 0.77
SMC4-209ENST00000468653 RAPGEF5Q92565 580 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 NDRG1Q92597 394 aaKnown RBP19.87■□□□□ 0.77
SMC4-209ENST00000468653 TRIM43Q96BQ3 446 aaPredicted RBP19.87■□□□□ 0.77
SMC4-209ENST00000468653 VWCEQ96DN2 955 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 NCAPGQ9BPX3 1015 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 EPB41L5Q9HCM4 733 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 CSNK1G1Q9HCP0 422 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 DMAP1Q9NPF5 467 aaPredicted RBP19.87■□□□□ 0.77
SMC4-209ENST00000468653 TMEM30AQ9NV96 361 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 MARCH5Q9NX47 278 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.87■□□□□ 0.773e-18■■■■■ 78.4
SMC4-209ENST00000468653 MICAL3Q7RTP6 2002 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 NT5C1B-RDH14C9J2C7 533 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 KIAA0355O15063 1070 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 PRPSAP2O60256 369 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 CSF2RAP15509 400 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 PTPN9P43378 593 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 ELAVL2Q12926 359 aaKnown RBP19.86■□□□□ 0.77
SMC4-209ENST00000468653 KCNT1Q5JUK3 1230 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 SCYL2Q6P3W7 929 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 FUT10Q6P4F1 479 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 CCNI2Q6ZMN8 369 aaPredicted RBP19.86■□□□□ 0.77
SMC4-209ENST00000468653 HERPUD2Q9BSE4 406 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 GPR62Q9BZJ7 368 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 ULBP1Q9BZM6 244 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 ZCWPW1Q9H0M4 648 aa19.86■□□□□ 0.77
SMC4-209ENST00000468653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMC4-209ENST00000468653 TTI1O43156 1089 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 OR4Q2P0C623 313 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 ITGB8P26012 769 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 PBX3P40426 434 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 YWHAZP63104 245 aaKnown RBP19.85■□□□□ 0.77
SMC4-209ENST00000468653 DR1Q01658 176 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 CYP1B1Q16678 543 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 MAP9Q49MG5 647 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 CTXN3Q4LDR2 81 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 SLC39A12Q504Y0 691 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 TFDP3Q5H9I0 405 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 KAZNQ674X7 775 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 GPRIN1Q7Z2K8 1008 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 TMEM199Q8N511 208 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 KCTD6Q8NC69 237 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 HSPH1Q92598 858 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 RUNDC3BQ96NL0 473 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 DDX23Q9BUQ8 820 aaKnown RBP19.85■□□□□ 0.77
SMC4-209ENST00000468653 CNGB3Q9NQW8 809 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 HHLA1C9JL84 531 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 DGKIO75912 1065 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 SEC31AO94979 1220 aaKnown RBP19.85■□□□□ 0.77
SMC4-209ENST00000468653 TJP3O95049 919 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 AMHP03971 560 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 MATKP42679 507 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 ALDH7A1P49419 539 aaKnown RBP19.85■□□□□ 0.77
SMC4-209ENST00000468653 DHX34Q14147 1143 aaKnown RBP19.85■□□□□ 0.77
SMC4-209ENST00000468653 RAB6CQ53S08 254 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 RAB41Q5JT25 222 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 CCDC137Q6PK04 289 aaKnown RBP19.85■□□□□ 0.77
SMC4-209ENST00000468653 ANKS1BQ7Z6G8 1248 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 DEFB106AQ8N104 65 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 C1orf54Q8WWF1 131 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 RAB6CQ9H0N0 254 aa19.85■□□□□ 0.77
SMC4-209ENST00000468653 DAB1O75553 588 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 KRT10P13645 584 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 FGFR3P22607 806 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 KDELR1P24390 212 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 PTPN7P35236 360 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 COILP38432 576 aaPredicted RBP19.84■□□□□ 0.77
SMC4-209ENST00000468653 KLF1Q13351 362 aaPredicted RBP19.84■□□□□ 0.77
SMC4-209ENST00000468653 ZNF280DQ6N043 979 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 MFSD5Q6N075 450 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 MTERF4Q7Z6M4 381 aaKnown RBP19.84■□□□□ 0.77
SMC4-209ENST00000468653 CCDC105Q8IYK2 499 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 C12orf50Q8NA57 414 aaPredicted RBP19.84■□□□□ 0.77
SMC4-209ENST00000468653 PEBP4Q96S96 227 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 LRRC19Q9H756 370 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 GDF3Q9NR23 364 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 HOMER3Q9NSC5 361 aa19.84■□□□□ 0.77
SMC4-209ENST00000468653 UTP11Q9Y3A2 253 aaKnown RBP19.84■□□□□ 0.77
SMC4-209ENST00000468653 hCG_1818297A0A087WSY0 165 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 FAM187AA6NFU0 413 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 ZSCAN5CA6NGD5 496 aaPredicted RBP19.83■□□□□ 0.77
SMC4-209ENST00000468653 OR6C75A6NL08 312 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 ZBED1O96006 694 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 USP17L7P0C7H9 530 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 GRIK1P39086 918 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 CDKN2BP42772 138 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 FNTAP49354 379 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 DAOAP59103 153 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 MRPL58Q14197 206 aaKnown RBP19.83■□□□□ 0.77
SMC4-209ENST00000468653 NFE2Q16621 373 aaPredicted RBP19.83■□□□□ 0.77
SMC4-209ENST00000468653 BOLA3Q53S33 107 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 DCAF6Q58WW2 860 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 TTC27Q6P3X3 843 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 CMASQ8NFW8 434 aaPredicted RBP19.83■□□□□ 0.77
SMC4-209ENST00000468653 IFT81Q8WYA0 676 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 TOP1MTQ969P6 601 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 B3GALT6Q96L58 329 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 POPDC2Q9HBU9 364 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms