RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ACLYP53396 1101 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 NLRP11P59045 1033 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 TPM4P67936 248 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 LAMTOR4Q0VGL1 99 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 MAPK7Q13164 816 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 DMP1Q13316 513 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ITGA7Q13683 1181 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 PKN2Q16513 984 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 EMC4Q5J8M3 183 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 MARCH8Q5T0T0 291 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ANKRD40Q6AI12 368 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 OGFOD2Q6N063 350 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ZC3H14Q6PJT7 736 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 PRR23BQ6ZRT6 265 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ZNF720Q7Z2F6 126 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 HAUS6Q7Z4H7 955 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ZC3H7AQ8IWR0 971 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 EXOC8Q8IYI6 725 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 DAW1Q8N136 415 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ADSSL1Q8N142 457 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 RNF149Q8NC42 400 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 KIAA0895Q8NCT3 520 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 PCDH19Q8TAB3 1148 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 SPATA20Q8TB22 786 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 SCFD1Q8WVM8 642 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 LMBR1Q8WVP7 490 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 DNAJB3Q8WWF6 145 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 PSPC1Q8WXF1 523 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 SEC14L1Q92503 715 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 KIFAP3Q92845 792 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 P2RX5Q93086 422 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 MFSD3Q96ES6 412 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 TSPAN17Q96FV3 270 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 BICD1Q96G01 975 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 EEF2KMTQ96G04 330 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 DHTKD1Q96HY7 919 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 NLRP4Q96MN2 994 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 GLT1D1Q96MS3 346 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ACCSQ96QU6 501 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 DIRC2Q96SL1 478 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 CEP89Q96ST8 783 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 MAP7D2Q96T17 732 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 TSG101Q99816 390 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 JPH2Q9BR39 696 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 FDXACB1Q9BRP7 624 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 TIPINQ9BVW5 301 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 SENP6Q9GZR1 1112 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 IKZF4Q9H2S9 585 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 PCIF1Q9H4Z3 704 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 NSUN3Q9H649 340 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 DHX33Q9H6R0 707 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 IPPKQ9H8X2 491 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 STARD7Q9NQZ5 370 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 KCND2Q9NZV8 630 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 MAGEC2Q9UBF1 373 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ODF2LQ9ULJ1 636 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 NRCAMQ92823 1304 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 LRRC37A2A6NM11 1700 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 COL1A2P08123 1366 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 THSD7BQ9C0I4 1608 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 IGKV6-21A0A0C4DH24 114 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 ZC3H12DA2A288 527 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 FRMD3A2A2Y4 597 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 GOLGA8IPA6NC78 632 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 GOLGA8JA6NMD2 632 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 ANKRD63C9JTQ0 380 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 INO80B-WBP1J3KQ70 363 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 K7ERI5 159 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 KRIT1O00522 736 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 PES1O00541 588 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 PSMA7O14818 248 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 GSTA4O15217 222 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 ASAP2O43150 1006 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 CALUO43852 315 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 MAFKO60675 156 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 CABYRO75952 493 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 KIF20AO95235 890 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 SGPL1O95470 568 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 C22orf31O95567 290 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 F2P00734 622 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 HARSP12081 509 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 FGFR4P22455 802 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 CCNE1P24864 410 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 THPOP40225 353 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 CYP2J2P51589 502 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 STRN3Q13033 797 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 CAPSQ13938 189 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 TFDP1Q14186 410 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 MXD4Q14582 209 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 SLC9A5Q14940 896 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 IQCB1Q15051 598 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 PPP2R5AQ15172 486 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 PTGISQ16647 500 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 MLANAQ16655 118 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 KNOP1Q1ED39 458 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 SPATA1Q5VX52 437 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 EGFLAMQ63HQ2 1017 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 STEAP3Q658P3 488 aa4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 CCSAPQ6IQ19 270 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-204ENST00000468545 STXBP4Q6ZWJ1 553 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms