RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CCDC42Q96M95 316 aa15.99■□□□□ 0.15
NPHP4-205ENST00000466897 SLITRK1Q96PX8 696 aa15.99■□□□□ 0.15
NPHP4-205ENST00000466897 BAG1Q99933 345 aaPredicted RBP15.99■□□□□ 0.15
NPHP4-205ENST00000466897 ISCUQ9H1K1 167 aa15.99■□□□□ 0.15
NPHP4-205ENST00000466897 SEPT11Q9NVA2 429 aaKnown RBP15.99■□□□□ 0.15
NPHP4-205ENST00000466897 DNMT3BQ9UBC3 853 aaKnown RBP15.99■□□□□ 0.15
NPHP4-205ENST00000466897 CD207Q9UJ71 328 aa15.99■□□□□ 0.15
NPHP4-205ENST00000466897 NAGPAQ9UK23 515 aa15.99■□□□□ 0.15
NPHP4-205ENST00000466897 STRIP2Q9ULQ0 834 aa15.99■□□□□ 0.15
NPHP4-205ENST00000466897 A0A087X0T9 212 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 SOBPA7XYQ1 873 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 E5RJQ4 531 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 ZBED1O96006 694 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 RHOP08100 348 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 ZDHHC11BP0C7U3 371 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 FAM228BP0C875 321 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 CDC25CP30307 473 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 MTHFRP42898 656 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 PSEN1P49768 467 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 RGS7P49802 495 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 USP46P62068 366 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
NPHP4-205ENST00000466897 ADIGQ0VDE8 80 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 MTMR3Q13615 1198 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 CCDC85BQ15834 202 aaPredicted RBP15.98■□□□□ 0.15
NPHP4-205ENST00000466897 PABPC1LQ4VXU2 614 aaKnown RBP15.98■□□□□ 0.15
NPHP4-205ENST00000466897 MON1BQ7L1V2 547 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 MAFAQ8NHW3 353 aaPredicted RBP15.98■□□□□ 0.15
NPHP4-205ENST00000466897 CPA5Q8WXQ8 436 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 HLA-CQ95604 372 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 RIPOR3Q96MK2 946 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 NECTIN4Q96NY8 510 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 DEF6Q9H4E7 631 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 PIDD1Q9HB75 910 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 IL21Q9HBE4 155 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 WDR6Q9NNW5 1121 aaKnown RBP15.98■□□□□ 0.15
NPHP4-205ENST00000466897 ST7Q9NRC1 585 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 ZMYM5Q9UJ78 669 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 DOCK8Q8NF50 2099 aa15.98■□□□□ 0.15
NPHP4-205ENST00000466897 CLUHO75153 1309 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 ZNF197O14709 1029 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 AKR1B10O60218 316 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 RTN2O75298 545 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 LCA5LO95447 670 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 F11P03951 625 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 CALB1P05937 261 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 PFKLP17858 780 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 TUBP50607 506 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 DAOAP59103 153 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 TAF10Q12962 218 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 PTP4A2Q12974 167 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 SMAD4Q13485 552 aaKnown RBP15.97■□□□□ 0.15
NPHP4-205ENST00000466897 PRSS36Q5K4E3 855 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 ATAT1Q5SQI0 421 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 CYP4A22Q5TCH4 519 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 BEND5Q7L4P6 421 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 BHLHA9Q7RTU4 235 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 MON1AQ86VX9 555 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 ARHGAP18Q8N392 663 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 ZNF276Q8N554 614 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 SUSD6Q92537 303 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 FBXO32Q969P5 355 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 C18orf8Q96DM3 657 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 TRIM11Q96F44 468 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 PPP1R9BQ96SB3 815 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 CORO1BQ9BR76 489 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.97■□□□□ 0.15
NPHP4-205ENST00000466897 TRIM62Q9BVG3 475 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 ULBP1Q9BZM6 244 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 ZNF334Q9HCZ1 680 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-205ENST00000466897 TLR8Q9NR97 1041 aaKnown RBP15.97■□□□□ 0.15
NPHP4-205ENST00000466897 ASNSD1Q9NWL6 643 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 HCFC1R1Q9NWW0 138 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 WDR35Q9P2L0 1181 aa15.97■□□□□ 0.15
NPHP4-205ENST00000466897 PAPSS1O43252 624 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 TADA3O75528 432 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 ERBB2P04626 1255 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 GLI1P08151 1106 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 MYBL1P10243 752 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 LCP1P13796 627 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 CYLC1P35663 651 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 MRPS5P82675 430 aaKnown RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 ZNF268Q14587 947 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 SKIV2LQ15477 1246 aaKnown RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 LEXMQ3ZCV2 418 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 C10orf76Q5T2E6 689 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 ALKBH5Q6P6C2 394 aaKnown RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 OLFML1Q6UWY5 402 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 TOGARAM2Q6ZUX3 1019 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 GAREM2Q75VX8 874 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 PDZD4Q76G19 769 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 ARCQ7LC44 396 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 GRASPQ7Z6J2 395 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 TMEM150AQ86TG1 271 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 LRRC8AQ8IWT6 810 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 STKLD1Q8NE28 680 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 GCNAQ96QF7 691 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 SYNCQ9H7C4 482 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 TAS2R14Q9NYV8 317 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms