RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 LCP1P13796 627 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 ADIGQ0VDE8 80 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 SFMBT2Q5VUG0 894 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 SPECC1LQ69YQ0 1117 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 CCDC186Q7Z3E2 898 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 MON1AQ86VX9 555 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 VSTM4Q8IW00 320 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 GJD3Q8N144 294 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 SIX6OS1Q8N1H7 587 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 WDTC1Q8N5D0 677 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 MAB21L3Q8N8X9 362 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 ZNF397Q8NF99 534 aaPredicted RBP15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 ZSCAN18Q8TBC5 510 aaPredicted RBP15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 SLC20A1Q8WUM9 679 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 UHRF1Q96T88 793 aaPredicted RBP15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 ULBP1Q9BZM6 244 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 TLR8Q9NR97 1041 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 CYTH4Q9UIA0 394 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 ZMYM5Q9UJ78 669 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 CAPN11Q9UMQ6 739 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 PATJQ8NI35 1801 aa15.22■□□□□ 0.03
DNMT3A-208ENST00000466601 C2orf78A6NCI8 922 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 PIK3R2O00459 728 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 GABBR2O75899 941 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 ZBED1O96006 694 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 GYPCP04921 128 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 ZDHHC11BP0C7U3 371 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 ACADSBP45954 432 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 RPL34P49207 117 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 ZBED6P86452 979 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 CDR2Q01850 454 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 ASIC2Q16515 512 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 FAM78AQ5JUQ0 283 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 SNX30Q5VWJ9 437 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 PM20D1Q6GTS8 502 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 IRF2BP2Q7Z5L9 587 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 TMEM35BQ8NCS4 154 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 C1orf131Q8NDD1 294 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 SMARCD2Q92925 531 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 ASB16Q96NS5 453 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 SLC4A5Q9BY07 1137 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 NUCKS1Q9H1E3 243 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 TRPC7Q9HCX4 862 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 CYLDQ9NQC7 956 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 CNGB3Q9NQW8 809 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 ST7Q9NRC1 585 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 AIPL1Q9NZN9 384 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 LUC7L2Q9Y383 392 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 DOCK8Q8NF50 2099 aa15.21■□□□□ 0.03
DNMT3A-208ENST00000466601 CUL9Q8IWT3 2517 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 ZNF638Q14966 1978 aaKnown RBP15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 TRAV19A0A0A6YYK7 116 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 ANHXE9PGG2 379 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 CHRNB2P17787 502 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 PFKLP17858 780 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 HDCP19113 662 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 WEE1P30291 646 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 CDH5P33151 784 aaPredicted RBP15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 PGFP49763 221 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 ZNF75DP51815 510 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 FMO1Q01740 532 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 PDCLQ13371 301 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 TRIM14Q14142 442 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 PARM1Q6UWI2 310 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 MTSS1LQ765P7 747 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 SCD5Q86SK9 330 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 TMEM110Q86TL2 294 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 ARID3BQ8IVW6 561 aaPredicted RBP15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 CMTM8Q8IZV2 173 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 SCML4Q8N228 414 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 ARL14EPQ8N8R7 260 aaPredicted RBP15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 ST13P5Q8NFI4 369 aaPredicted RBP15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 NDRG1Q92597 394 aaKnown RBP15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 NXPE3Q969Y0 559 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 NOX5Q96PH1 765 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 CYP2S1Q96SQ9 504 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 MIS12Q9H081 205 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 NMUR1Q9HB89 426 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 ZFP14Q9HCL3 533 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 CD320Q9NPF0 282 aa15.2■□□□□ 0.02
DNMT3A-208ENST00000466601 A0A1W2PQH9 124 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 E5RJQ4 531 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 FBXO21O94952 628 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 LSM8O95777 96 aaKnown RBP15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 OAS1P00973 400 aaKnown RBP15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 CASP14P31944 242 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 AVPR1AP37288 418 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 PSEN1P49768 467 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 TUBP50607 506 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 DAOAP59103 153 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 YWHAGP61981 247 aaKnown RBP eCLIP15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 HTR4Q13639 388 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 HECTD3Q5T447 861 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 E4F1Q66K89 784 aaPredicted RBP15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 TANGO2Q6ICL3 276 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 TRIM72Q6ZMU5 477 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 BHLHA9Q7RTU4 235 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 RNF135Q8IUD6 432 aa15.19■□□□□ 0.02
DNMT3A-208ENST00000466601 ARHGAP18Q8N392 663 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms