RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 VWA8A3KMH1 1905 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 EIF4E1BA6NMX2 242 aaKnown RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 KCNJ18B7U540 433 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 CYB561D2O14569 222 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 AXIN1O15169 862 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 NCAM2O15394 837 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 RFPL2O75678 378 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 EPN2O95208 641 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 C4BPAP04003 597 aaKnown RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 KLRC2P26717 231 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 HOXA9P31269 272 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 PMS1P54277 932 aaKnown RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 STX17P56962 302 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 SLC8A3P57103 927 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 NOP14P78316 857 aaKnown RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 SATB1Q01826 763 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 GCNT1Q02742 428 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 KCNJ12Q14500 433 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 WDR72Q3MJ13 1102 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 TCP11X2Q5H9J9 407 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 LIN9Q5TKA1 542 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 CDKAL1Q5VV42 579 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 RNF43Q68DV7 783 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 GBP6Q6ZN66 633 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 C4orf50Q6ZRC1 276 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 CEP57Q86XR8 500 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 ADGRF2Q8IZF7 708 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 ELMOD1Q8N336 334 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 C12orf50Q8NA57 414 aaPredicted RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 C3orf58Q8NDZ4 430 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 OR5B17Q8NGF7 314 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 SPPL2BQ8TCT7 592 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 HNRNPLLQ8WVV9 542 aaKnown RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 CCDC97Q96F63 343 aaPredicted RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 FUBP3Q96I24 572 aaKnown RBP eCLIP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 LRIG1Q96JA1 1093 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 LOXL4Q96JB6 756 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 CALR3Q96L12 384 aaKnown RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 MMS19Q96T76 1030 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 ACBD6Q9BR61 282 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 TUBGCP2Q9BSJ2 902 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 NIF3L1Q9GZT8 377 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 DNAJC25Q9H1X3 360 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 IKZF4Q9H2S9 585 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 SNX25Q9H3E2 840 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 SMOC1Q9H4F8 434 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 ABCB6Q9NP58 842 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 ZDHHC7Q9NXF8 308 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 ZMYM5Q9UJ78 669 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 FCF1Q9Y324 198 aaKnown RBP7.38□□□□□ -1.23
CLDN4-204ENST00000466411 SNX9Q9Y5X1 595 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 ATG2BQ96BY7 2078 aa7.38□□□□□ -1.23
CLDN4-204ENST00000466411 C4orf47A7E2U8 309 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 PES1O00541 588 aaKnown RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 MEFVO15553 781 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 B4GALT3O60512 393 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 XYLBO75191 536 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 KRT38O76015 456 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 PAPSS2O95340 614 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 FGF19O95750 216 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 HLA-DRAP01903 254 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 HNRNPA1P09651 372 aaKnown RBP eCLIP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 TRIM49P0CI25 452 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 TRIM49CP0CI26 452 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 CPB1P15086 417 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 WARSP23381 471 aaKnown RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 TKTP29401 623 aaKnown RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 HOXA6P31267 233 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 ELF1P32519 619 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 GCLMP48507 274 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 TUFMP49411 452 aaKnown RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 ZNF445P59923 1031 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 NR1H3Q13133 447 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 GPR17Q13304 367 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 RAB33AQ14088 237 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 MRPL58Q14197 206 aaKnown RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 STILQ15468 1287 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 EXOC3L4Q17RC7 722 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 CTXN3Q4LDR2 81 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 VWA3BQ502W6 1294 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 TCEAL6Q6IPX3 200 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 TPRG1Q6ZUI0 275 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 LIMS2Q7Z4I7 341 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 LONP2Q86WA8 852 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 ZNF843Q8N446 348 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 LEMD2Q8NC56 503 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 ZSWIM2Q8NEG5 633 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 ZNF461Q8TAF7 563 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 CXorf38Q8TB03 319 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 LNX1Q8TBB1 728 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 HASPINQ8TF76 798 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 TCEAL3Q969E4 200 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 NT5C1BQ96P26 610 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 OCSTAMPQ9BR26 566 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 PAAF1Q9BRP4 392 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 IER2Q9BTL4 223 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 NDST4Q9H3R1 872 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 TSPY26PQ9H489 355 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 GCNT4Q9P109 453 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms