RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 POMCP01189 267 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 PTPN1P18031 435 aaKnown RBP14.18□□□□□ -0.14
UBE4B-206ENST00000466379 SLCO1A2P46721 670 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 LMNB2Q03252 620 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 DPYSL3Q14195 570 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 KDM7AQ6ZMT4 941 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 HACE1Q8IYU2 909 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 TAB3Q8N5C8 712 aaPredicted RBP14.18□□□□□ -0.14
UBE4B-206ENST00000466379 EPS8L3Q8TE67 593 aaKnown RBP14.18□□□□□ -0.14
UBE4B-206ENST00000466379 STK32AQ8WU08 396 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 TNIP3Q96KP6 325 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 MAGEB5Q9BZ81 275 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 FAM129AQ9BZQ8 928 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 ZMYND15Q9H091 742 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 SLC38A7Q9NVC3 462 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 DDX43Q9NXZ2 648 aaKnown RBP14.18□□□□□ -0.14
UBE4B-206ENST00000466379 DRG1Q9Y295 367 aaKnown RBP14.18□□□□□ -0.14
UBE4B-206ENST00000466379 ITGAVP06756 1048 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 NRLP54845 237 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 EIF3BP55884 814 aaKnown RBP14.17□□□□□ -0.14
UBE4B-206ENST00000466379 HDAC4P56524 1084 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 SKOR1P84550 965 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 KRT81Q14533 505 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 DEFB115Q30KQ5 88 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 HIBCHQ6NVY1 386 aaPredicted RBP14.17□□□□□ -0.14
UBE4B-206ENST00000466379 PAQR9Q6ZVX9 377 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 PIGZQ86VD9 579 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 MED10Q9BTT4 135 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 SRRDQ9UH36 339 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 DDX20Q9UHI6 824 aaKnown RBP14.17□□□□□ -0.14
UBE4B-206ENST00000466379 DNALI1O14645 258 aaPredicted RBP14.17□□□□□ -0.14
UBE4B-206ENST00000466379 SHOX2O60902 331 aaPredicted RBP14.17□□□□□ -0.14
UBE4B-206ENST00000466379 ACTN2P35609 894 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 IRAK1P51617 712 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 MAGOHP61326 146 aaKnown RBP14.17□□□□□ -0.14
UBE4B-206ENST00000466379 GUCY1A3Q02108 690 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 CAV1Q03135 178 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 ADIGQ0VDE8 80 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 KYNUQ16719 465 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 AGBL2Q5U5Z8 902 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 LRRC31Q6UY01 552 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 DSTYKQ6XUX3 929 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 RPAINQ86UA6 219 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 HASPINQ8TF76 798 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 ADAM2Q99965 735 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 SNRNP25Q9BV90 132 aaKnown RBP14.17□□□□□ -0.14
UBE4B-206ENST00000466379 CRTAC1Q9NQ79 661 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 EFR3BQ9Y2G0 817 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 INPP5FQ9Y2H2 1132 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 GIT1Q9Y2X7 761 aa14.17□□□□□ -0.14
UBE4B-206ENST00000466379 ENDOD1O94919 500 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 CST5P28325 142 aaPredicted RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 NDUFV1P49821 464 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 ACLYP53396 1101 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 C1orf228Q6PIY5 440 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 LEKR1Q6ZMV7 388 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 TRMT10CQ7L0Y3 403 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 ZDHHC17Q8IUH5 632 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 UNC45BQ8IWX7 931 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 PCSK9Q8NBP7 692 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 HNRNPABQ99729 332 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 MAK16Q9BXY0 300 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 RSAD1Q9HA92 442 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 NINJ2Q9NZG7 142 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 GABRDO14764 452 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 XPO1O14980 1071 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 MAP3K6O95382 1288 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 RPL34P49207 117 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 MAP3K7CLP57077 242 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 SNX16P57768 344 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 EIF3EP60228 445 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 TRIM71Q2Q1W2 868 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 HP1BP3Q5SSJ5 553 aaPredicted RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 SLC26A9Q7LBE3 791 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 MRPL10Q7Z7H8 261 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 ZC3H18Q86VM9 953 aaKnown RBP14.16□□□□□ -0.14
UBE4B-206ENST00000466379 HOOK3Q86VS8 718 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 BBOF1Q8ND07 529 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 LRRN4Q8WUT4 740 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 C9orf72Q96LT7 481 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 DUSP16Q9BY84 665 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 CALCOCO1Q9P1Z2 691 aa14.16□□□□□ -0.14
UBE4B-206ENST00000466379 APOC4-APOC2K7ER74 178 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 APOC2P02655 101 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 NPR3P17342 541 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 IL4RP24394 825 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 PTK7Q13308 1070 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 DSC3Q14574 896 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 TIGD5Q53EQ6 642 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 PPP6R3Q5H9R7 873 aaPredicted RBP14.15□□□□□ -0.14
UBE4B-206ENST00000466379 MAP3K21Q5TCX8 1036 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 CLEC20AQ6ZU45 233 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 RNF180Q86T96 592 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 TTC13Q8NBP0 860 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 SPATA18Q8TC71 538 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 RAET1EQ8TD07 263 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 HSFY1Q96LI6 401 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 TBCBQ99426 244 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 SYT15Q9BQS2 421 aa14.15□□□□□ -0.14
UBE4B-206ENST00000466379 TRPV6Q9H1D0 765 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms