RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ALPK3Q96L96 1907 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 GOLGA6L10A6NI86 522 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 KRIT1O00522 736 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 C2CD2LO14523 706 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 SYN3O14994 580 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 EFEMP2O95967 443 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 LINC00271P0C7V0 271 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 BCAT1P54687 386 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 MESDQ14696 234 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 TAF5Q15542 800 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 CTXN3Q4LDR2 81 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 LIN9Q5TKA1 542 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 SPRED2Q7Z698 418 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 SPATS2Q86XZ4 545 aaKnown RBP19.54■□□□□ 0.72
CAPN3-209ENST00000466222 HERC6Q8IVU3 1022 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 C10orf67Q8IYJ2 551 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 COLGALT1Q8NBJ5 622 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 ZMIZ2Q8NF64 920 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 CLEC4CQ8WTT0 213 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 NDRG1Q92597 394 aaKnown RBP19.54■□□□□ 0.72
CAPN3-209ENST00000466222 ATP6V1G3Q96LB4 118 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 ZNF558Q96NG5 402 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 PGLYRP2Q96PD5 576 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 NAP1L3Q99457 506 aaPredicted RBP19.54■□□□□ 0.72
CAPN3-209ENST00000466222 MIS12Q9H081 205 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 ANAPC7Q9UJX3 599 aa19.54■□□□□ 0.72
CAPN3-209ENST00000466222 MICAL3Q7RTP6 2002 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 SART1O43290 800 aaKnown RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 AP1G2O75843 785 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 CALB1P05937 261 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 MYBL1P10243 752 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 ATP2A2P16615 1042 aaKnown RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 RPL17P18621 184 aaKnown RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 HTRA4P83105 476 aaPredicted RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 PLCB3Q01970 1234 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 HLTFQ14527 1009 aaKnown RBP eCLIP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 FAM109BQ6ICB4 259 aaPredicted RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 PIGZQ86VD9 579 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 SLC39A11Q8N1S5 342 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 ARFGAP2Q8N6H7 521 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 BCAS4Q8TDM0 211 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 MCEEQ96PE7 176 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 SLC4A5Q9BY07 1137 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 AVENQ9NQS1 362 aaPredicted RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 ATXN2Q99700 1313 aaKnown RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 GRXCR1A8MXD5 290 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 ADAM12O43184 909 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 GRAP2O75791 330 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 LCP1P13796 627 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 NPR3P17342 541 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 GABRB2P47870 512 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 NDUFV1P49821 464 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 HADHBP55084 474 aaKnown RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 RNASE9P60153 205 aaKnown RBP19.53■□□□□ 0.72
CAPN3-209ENST00000466222 TCEAL1Q15170 157 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 SPDYCQ5MJ68 293 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 FAM183BPQ6ZVS7 135 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 GPRIN1Q7Z2K8 1008 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 EMC1Q8N766 993 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 JOSD2Q8TAC2 188 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 SPATA18Q8TC71 538 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 SEC14L1Q92503 715 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 TRIM11Q96F44 468 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 FAM114A2Q9NRY5 505 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 PARVAQ9NVD7 372 aa19.53■□□□□ 0.72
CAPN3-209ENST00000466222 PAPSS1O43252 624 aaPredicted RBP19.52■□□□□ 0.72
CAPN3-209ENST00000466222 FAM200BP0CF97 657 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 MYOGP15173 224 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 CYP2F1P24903 491 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 ECHS1P30084 290 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 TSPY1Q01534 308 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 OGDHQ02218 1023 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 PPP1R15BQ5SWA1 713 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 DNAJC24Q6P3W2 148 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 TMEM110Q86TL2 294 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 AUTS2Q8WXX7 1259 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 PPM1EQ8WY54 764 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 ZCWPW1Q9H0M4 648 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 UVRAGQ9P2Y5 699 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 ALG6Q9Y672 507 aa19.52■□□□□ 0.72
CAPN3-209ENST00000466222 TDRD15B5MCY1 1934 aaKnown RBP19.52■□□□□ 0.71
CAPN3-209ENST00000466222 ARHGEF37A1IGU5 675 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 MTA2O94776 668 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 KRT14P02533 472 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 RFC1P35251 1148 aaPredicted RBP19.51■□□□□ 0.71
CAPN3-209ENST00000466222 OR6B2Q6IFH4 312 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 B4GALNT4Q76KP1 1039 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 RNF168Q8IYW5 571 aaPredicted RBP19.51■□□□□ 0.71
CAPN3-209ENST00000466222 TTC9BQ8N6N2 239 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 C3orf20Q8ND61 904 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 STKLD1Q8NE28 680 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 CARD9Q9H257 536 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 TMBIM4Q9HC24 238 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 ABI2Q9NYB9 513 aaPredicted RBP19.51■□□□□ 0.71
CAPN3-209ENST00000466222 PLAAQ9Y263 795 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 INSL6Q9Y581 213 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 XPO1O14980 1071 aaKnown RBP19.51■□□□□ 0.71
CAPN3-209ENST00000466222 TRIM66O15016 1216 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms