RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 SLC20A1Q8WUM9 679 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 SLC35F5Q8WV83 523 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 IRGQQ8WZA9 623 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 GOLGA1Q92805 767 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PPP2R3CQ969Q6 453 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 ZNF653Q96CK0 615 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 C8orf48Q96LL4 319 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 RNPC3Q96LT9 517 aaKnown RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 CDK5RAP1Q96SZ6 601 aaKnown RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PAAF1Q9BRP4 392 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 TACO1Q9BSH4 297 aaKnown RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 MED10Q9BTT4 135 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 SELENOOQ9BVL4 669 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 ZCWPW1Q9H0M4 648 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 LMAN2LQ9H0V9 348 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 CXCL16Q9H2A7 254 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 LRRC4Q9HBW1 653 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 DMAP1Q9NPF5 467 aaPredicted RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 CNGB3Q9NQW8 809 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 MARCH5Q9NX47 278 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 CTTNBP2NLQ9P2B4 639 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 MTRRQ9UBK8 725 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 CNOT8Q9UFF9 292 aaKnown RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 IP6K2Q9UHH9 426 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 MSRAQ9UJ68 235 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 GUCA1BQ9UMX6 200 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PCDHGC5Q9Y5F6 944 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 DNAH12Q6ZR08 3092 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 FNDC1Q4ZHG4 1894 aaPredicted RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CTAGE9A4FU28 777 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CES2O00748 559 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 TBC1D4O60343 1298 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 AP1G2O75843 785 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 FGF18O76093 207 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 ADH1AP07327 375 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 PNMA6AP0CW24 399 aaPredicted RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CTSAP10619 480 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 KRT3P12035 628 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 TNNT1P13805 278 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CPB1P15086 417 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 TKTP29401 623 aaKnown RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CASQ1P31415 396 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 ELF1P32519 619 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 MAN1A1P33908 653 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CETN2P41208 172 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 RGS19P49795 217 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 NDUFV1P49821 464 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 GNG11P61952 73 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 PDCLQ13371 301 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 RAB33AQ14088 237 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 PSMD5Q16401 504 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 HADHQ16836 314 aaKnown RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 GOLGA7BQ2TAP0 167 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 PAN2Q504Q3 1202 aaKnown RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 MDH1BQ5I0G3 518 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 KIAA0319Q5VV43 1072 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 DNAJC24Q6P3W2 148 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 DCUN1D2Q6PH85 259 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CCDC149Q6ZUS6 474 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 TADA2BQ86TJ2 420 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 FAM35AQ86V20 835 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 OSTM1Q86WC4 334 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CEP57Q86XR8 500 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 SIX6OS1Q8N1H7 587 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 ZNF276Q8N554 614 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 UBL4BQ8N7F7 174 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 NIPA2Q8N8Q9 360 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 ZNF461Q8TAF7 563 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 SLC35G2Q8TBE7 412 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 FEZF2Q8TBJ5 459 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 ZNF564Q8TBZ8 553 aaPredicted RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 SLC2A14Q8TDB8 520 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 CPA5Q8WXQ8 436 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 OVCA2Q8WZ82 227 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 TFAP2BQ92481 460 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 MCRS1Q96EZ8 462 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 PCED1BQ96HM7 432 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 FAM84AQ96KN4 292 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 SPATA17Q96L03 361 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 TWNKQ96RR1 684 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 TGS1Q96RS0 853 aaKnown RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 PCDHB18PQ96TA0 734 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 NAP1L3Q99457 506 aaPredicted RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 NAPGQ99747 312 aaPredicted RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 GDF15Q99988 308 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 DESI2Q9BSY9 194 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 UBE2OQ9C0C9 1292 aaKnown RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 THAP2Q9H0W7 228 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 PRDM16Q9HAZ2 1276 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 RXFP1Q9HBX9 757 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 LZTFL1Q9NQ48 299 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 ST7Q9NRC1 585 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 TRMT1Q9NXH9 659 aaKnown RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 UXTQ9UBK9 157 aaPredicted RBP6.32□□□□□ -1.4
CHMP3-206ENST00000466032 HMGXB4Q9UGU5 601 aa6.32□□□□□ -1.4
CHMP3-206ENST00000466032 AFF4Q9UHB7 1163 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms