RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PTTG2Q9NZH5 202 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 PCDHAC2Q9Y5I4 1007 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 GMEB1Q9Y692 573 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 SDR42E2A6NKP2 422 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 PEX1O43933 1283 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 VCLP18206 1134 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 SSTR3P32745 418 aaPredicted RBP20.54■□□□□ 0.88
SDF4-205ENST00000465727 HADHQ16836 314 aaKnown RBP20.54■□□□□ 0.88
SDF4-205ENST00000465727 LMBRD2Q68DH5 695 aaPredicted RBP20.54■□□□□ 0.88
SDF4-205ENST00000465727 GSTCDQ8NEC7 633 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 RDM1Q8NG50 284 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 IL31RAQ8NI17 732 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 LMCD1Q9NZU5 365 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 SAE1Q9UBE0 346 aaPredicted RBP20.54■□□□□ 0.88
SDF4-205ENST00000465727 CIDEBQ9UHD4 219 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 SERPINA10Q9UK55 444 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 FEM1BQ9UK73 627 aa20.54■□□□□ 0.88
SDF4-205ENST00000465727 APOC4-APOC2K7ER74 178 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 TRDMT1O14717 391 aaKnown RBP20.53■□□□□ 0.88
SDF4-205ENST00000465727 TMCC1O94876 653 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 KLHL2O95198 593 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 APOC2P02655 101 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 ASLP04424 464 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 CHN2P52757 468 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 GHRHRQ02643 423 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 SLC25A11Q02978 314 aaKnown RBP20.53■□□□□ 0.88
SDF4-205ENST00000465727 UNC45BQ8IWX7 931 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 DGCR14Q96DF8 476 aaKnown RBP20.53■□□□□ 0.88
SDF4-205ENST00000465727 OCEL1Q9H607 264 aa20.53■□□□□ 0.88
SDF4-205ENST00000465727 ARID2Q68CP9 1835 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 BTBD19C9JJ37 291 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 MCF2LO15068 1137 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 CHADO15335 359 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 LIG4P49917 911 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 MRPS5P82675 430 aaKnown RBP20.52■□□□□ 0.88
SDF4-205ENST00000465727 MMEL1Q495T6 779 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 ANKRD20A4Q4UJ75 823 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 TMEM259Q4ZIN3 620 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 SFT2D3Q587I9 215 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 ANO5Q75V66 913 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 MCF2L2Q86YR7 1114 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 SLC25A41Q8N5S1 370 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 MCPH1Q8NEM0 835 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 ACER1Q8TDN7 264 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 FAM84AQ96KN4 292 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 MECRQ9BV79 373 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 THAP1Q9NVV9 213 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 COL20A1Q9P218 1284 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 ARHGAP28Q9P2N2 729 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 STYXL1Q9Y6J8 313 aa20.52■□□□□ 0.88
SDF4-205ENST00000465727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.52■□□□□ 0.87
SDF4-205ENST00000465727 ARHGAP42A6NI28 874 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 CASQ2O14958 399 aaPredicted RBP20.52■□□□□ 0.87
SDF4-205ENST00000465727 C1QAP02745 245 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 ETS2P15036 469 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 KDELR1P24390 212 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 MRPS9P82933 396 aaKnown RBP20.52■□□□□ 0.87
SDF4-205ENST00000465727 PDE1BQ01064 536 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 BTKQ06187 659 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 MSLNQ13421 630 aaPredicted RBP20.52■□□□□ 0.87
SDF4-205ENST00000465727 KCNJ11Q14654 390 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 DEFB132Q7Z7B7 95 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 WDR75Q8IWA0 830 aaKnown RBP20.52■□□□□ 0.87
SDF4-205ENST00000465727 FAM71DQ8N9W8 422 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 FNIP1Q8TF40 1166 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 CSRNP1Q96S65 589 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 SLC9A2Q9UBY0 812 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 ITGA11Q9UKX5 1188 aa20.52■□□□□ 0.87
SDF4-205ENST00000465727 STAM2O75886 525 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 KRT38O76015 456 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 ICAM1P05362 532 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 PRKCHP24723 683 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 CDH5P33151 784 aaPredicted RBP20.51■□□□□ 0.87
SDF4-205ENST00000465727 GRIA2P42262 883 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 EIF3EP60228 445 aaKnown RBP20.51■□□□□ 0.87
SDF4-205ENST00000465727 PDK3Q15120 406 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 STRIP1Q5VSL9 837 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 SMYD5Q6GMV2 418 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 NCAPG2Q86XI2 1143 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 UBR7Q8N806 425 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 GDPD5Q8WTR4 605 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 PYDC1Q8WXC3 89 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 LENG1Q96BZ8 264 aaPredicted RBP20.51■□□□□ 0.87
SDF4-205ENST00000465727 NLRP4Q96MN2 994 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 FAM96AQ9H5X1 160 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 C10orf88Q9H8K7 445 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 TTLL3Q9Y4R7 772 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 NUB1Q9Y5A7 615 aa20.51■□□□□ 0.87
SDF4-205ENST00000465727 TNS1Q9HBL0 1735 aaKnown RBP20.51■□□□□ 0.87
SDF4-205ENST00000465727 ZNF862O60290 1169 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 RFPL1O75677 317 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 BPGMP07738 259 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 EIF4BP23588 611 aaKnown RBP20.5■□□□□ 0.87
SDF4-205ENST00000465727 COPAP53621 1224 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 AQP4P55087 323 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 ARMC3Q5W041 872 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 PGM2L1Q6PCE3 622 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 ALDH16A1Q8IZ83 802 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 PPM1NQ8N819 430 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 ACTRT2Q8TDY3 377 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms