RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 TXNDC9O14530 226 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 FAM189A1O60320 539 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 SUPT3HO75486 399 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 SPAG6O75602 509 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 ZNF189O75820 626 aaPredicted RBP11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 KLRK1P26718 216 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 MLH1P40692 756 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 NOP14P78316 857 aaKnown RBP11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 NFX1Q12986 1120 aaKnown RBP11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 CCNIQ14094 377 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 TFDP1Q14186 410 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 LPIN1Q14693 890 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 TRIP10Q15642 601 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 MYLK3Q32MK0 819 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 SH3D19Q5HYK7 790 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 PACS1Q6VY07 963 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 RNF111Q6ZNA4 994 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 PALM2Q8IXS6 379 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 PPIL6Q8IXY8 311 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 PYDC1Q8WXC3 89 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 DHX38Q92620 1227 aaKnown RBP11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 E2F7Q96AV8 911 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 LENG9Q96B70 501 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 MRRFQ96E11 262 aaKnown RBP11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 VCPIP1Q96JH7 1222 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 FAM111AQ96PZ2 611 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 HAUS8Q9BT25 410 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 GGA1Q9UJY5 639 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 COQ4Q9Y3A0 265 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 TMED5Q9Y3A6 229 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 IKBKGQ9Y6K9 419 aa11.99□□□□□ -0.49
TNRC6A-205ENST00000464539 KIAA0100Q14667 2235 aaKnown RBP11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 SDR42E2A6NKP2 422 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L20D6RJB6 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 PDE5AO76074 875 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 STK10O94804 968 aaKnown RBP11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 MYL4P12829 197 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 GLRA2P23416 452 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 VARSP26640 1264 aaKnown RBP11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 PEX2P28328 305 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 SREBF1P36956 1147 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 GCLMP48507 274 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 GPC3P51654 580 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 VCPP55072 806 aaKnown RBP11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 OXCT1P55809 520 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 HDAC4P56524 1084 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 DLG4P78352 724 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L24Q0WX57 530 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 CBLBQ13191 982 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 APOFQ13790 326 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 HSF5Q4G112 596 aaPredicted RBP11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 ODR4Q5SWX8 454 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 LRRC8BQ6P9F7 803 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 FBXL19Q6PCT2 694 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 USP17L6PQ6QN14 398 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 CCDC80Q76M96 950 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 KBTBD6Q86V97 674 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 PPM1KQ8N3J5 372 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 CCDC33Q8N5R6 958 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 METTL25Q8N6Q8 603 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 XXYLT1Q8NBI6 393 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 TTC13Q8NBP0 860 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 ITPKCQ96DU7 683 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 NACC1Q96RE7 527 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 ALG13Q9NP73 1137 aaKnown RBP11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 MKS1Q9NXB0 559 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 DNPEPQ9ULA0 475 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 FAF1Q9UNN5 650 aaPredicted RBP11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 PSME4Q14997 1843 aa11.98□□□□□ -0.49
TNRC6A-205ENST00000464539 FAM170AA1A519 330 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 DNAJA2O60884 412 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 CYP3A4P08684 503 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 PMLP29590 882 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 ALDH1A3P47895 512 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 GJA8P48165 433 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 NUP107P57740 925 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 COG7P83436 770 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 TMEM62Q0P6H9 643 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 BTG3Q14201 252 aaPredicted RBP11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 ARHGEF6Q15052 776 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 TLR1Q15399 786 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 OASLQ15646 514 aaKnown RBP11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 LRRC36Q1X8D7 754 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 C1orf220Q5T0J3 134 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 LGSNQ5TDP6 509 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 LRRC38Q5VT99 294 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 KRT39Q6A163 491 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 PODNQ7Z5L7 613 aa11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 PATL1Q86TB9 770 aaKnown RBP11.97□□□□□ -0.49
TNRC6A-205ENST00000464539 SLF2Q8IX21 1173 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms