RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 EPAS1Q99814 870 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 ING2Q9H160 280 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 ERAP1Q9NZ08 941 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 SLC12A6Q9UHW9 1150 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 AKAP12Q02952 1782 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 E5RJQ4 531 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 LCA5LO95447 670 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 NUDT17P0C025 328 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 PAMP19021 973 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 MUTP22033 750 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 AMPD1P23109 780 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 GTF2BQ00403 316 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 CRYMQ14894 314 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 BTBD8Q5XKL5 378 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 NCLNQ969V3 563 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 ELMO2Q96JJ3 720 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 CNPY3Q9BT09 278 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 ARHGAP26Q9UNA1 814 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 DCCP43146 1447 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 AKAP10O43572 662 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 HBP1O60381 514 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 ZMPSTE24O75844 475 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 CYP2C9P11712 490 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 MLH1P40692 756 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 MMP13P45452 471 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 PAPOLAP51003 745 aaKnown RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 ITPRIPL1Q6GPH6 555 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 COPS5Q92905 334 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 USP13Q92995 863 aaPredicted RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 RMDN1Q96DB5 314 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 TMEM176AQ96HP8 235 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 MECRQ9BV79 373 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 ATXN3LQ9H3M9 355 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 SLC24A2Q9UI40 661 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 AP4E1Q9UPM8 1137 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 NCANO14594 1321 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 GRIN2DO15399 1336 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 UMODL1Q5DID0 1318 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 AFDNP55196 1824 aaKnown RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 M0R2N6 131 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 SHOX2O60902 331 aaPredicted RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 E2F6O75461 281 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 HMGCRP04035 888 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 ZNF286BP0CG31 522 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 GNAT1P11488 350 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 TFE3P19532 575 aaPredicted RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 ETFBP38117 255 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 SERPINB9P50453 376 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 HSD17B4P51659 736 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 MARSP56192 900 aaKnown RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 MTFR1Q15390 333 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 HYIQ5T013 277 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 ZNF513Q8N8E2 541 aaPredicted RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 RDM1Q8NG50 284 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 TFB1MQ8WVM0 346 aaKnown RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 SCG3Q8WXD2 468 aaKnown RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 ART4Q93070 314 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 IFT43Q96FT9 208 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 CELF6Q96J87 481 aaKnown RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 DDX50Q9BQ39 737 aaKnown RBP9.4□□□□□ -0.9
HPS4-208ENST00000464362 PTPRHQ9HD43 1115 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 HES2Q9Y543 173 aa9.4□□□□□ -0.9
HPS4-208ENST00000464362 TSPAN3O60637 253 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 HNRNPCL1O60812 293 aaKnown RBP9.4□□□□□ -0.91
HPS4-208ENST00000464362 SPAG6O75602 509 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 JCHAINP01591 159 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 AKAP5P24588 427 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 RPL22P35268 128 aaKnown RBP9.4□□□□□ -0.91
HPS4-208ENST00000464362 FLOT2Q14254 428 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 C6orf10Q5SRN2 563 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 OLFML2BQ68BL8 750 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 ANGPTL8Q6UXH0 198 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 SH3BP5LQ7L8J4 393 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 DEFB107AQ8IZN7 70 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 ZCCHC9Q8N567 271 aaKnown RBP9.4□□□□□ -0.91
HPS4-208ENST00000464362 HASPINQ8TF76 798 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 CMTM5Q96DZ9 223 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 CNBD2Q96M20 576 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 ZNF560Q96MR9 790 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 LRRC19Q9H756 370 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 SP110Q9HB58 689 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 WRAP73Q9P2S5 460 aaPredicted RBP9.4□□□□□ -0.91
HPS4-208ENST00000464362 ZNF711Q9Y462 761 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 LTN1O94822 1766 aa9.4□□□□□ -0.91
HPS4-208ENST00000464362 MYH8P13535 1937 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 LGR5O75473 907 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 CCNE2O96020 404 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 CYP1A2P05177 515 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 C6orf222P0C671 652 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 INSRRP14616 1297 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 GLRA2P23416 452 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 NCALDP61601 193 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 N4BP2L1Q5TBK1 243 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 YTHDF3Q7Z739 585 aaKnown RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 AGBL3Q8NEM8 1001 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 BSNDQ8WZ55 320 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 BHMTQ93088 406 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 OSMRQ99650 979 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 FAM96AQ9H5X1 160 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms