RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 NR1D1P20393 614 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 IL4RP24394 825 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 RPL34P49207 117 aaKnown RBP13.41□□□□□ -0.26
VAPB-203ENST00000463370 DPYSL3Q14195 570 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 SLMAPQ14BN4 828 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 MDH1BQ5I0G3 518 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 PIGZQ86VD9 579 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 RFX6Q8HWS3 928 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 CRTAC1Q9NQ79 661 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 DDX20Q9UHI6 824 aaKnown RBP13.41□□□□□ -0.26
VAPB-203ENST00000463370 THSD7BQ9C0I4 1608 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 SGK1O00141 431 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 SHOX2O60902 331 aaPredicted RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 ITGAVP06756 1048 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 SDC4P31431 198 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 NDUFV1P49821 464 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 ACLYP53396 1101 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 GPS1Q13098 491 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 DSC3Q14574 896 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 DEFB115Q30KQ5 88 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 HIBCHQ6NVY1 386 aaPredicted RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 MRPL10Q7Z7H8 261 aaKnown RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 TNIP3Q96KP6 325 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 C11orf84Q9BUA3 381 aaPredicted RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 RABEP2Q9H5N1 569 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 TMEM30AQ9NV96 361 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 NOVA2Q9UNW9 492 aaKnown RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 DRG1Q9Y295 367 aaKnown RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 EFR3BQ9Y2G0 817 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 F8W810 466 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 SLCO1A2P46721 670 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 GUCY1A3Q02108 690 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 ADIGQ0VDE8 80 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 KYNUQ16719 465 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 KDM7AQ6ZMT4 941 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 SLC26A9Q7LBE3 791 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 TAB3Q8N5C8 712 aaPredicted RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 ADAM2Q99965 735 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 SNRNP25Q9BV90 132 aaKnown RBP13.4□□□□□ -0.26
VAPB-203ENST00000463370 CAPS2Q9BXY5 557 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 FAM129AQ9BZQ8 928 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 TRPV6Q9H1D0 765 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 SLC38A7Q9NVC3 462 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 GIT1Q9Y2X7 761 aa13.4□□□□□ -0.26
VAPB-203ENST00000463370 TLDC2A0PJX2 215 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 MYBPHLA2RUH7 354 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 IRAK1P51617 712 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 CACNA2D1P54289 1103 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 PITX1P78337 314 aaPredicted RBP13.39□□□□□ -0.27
VAPB-203ENST00000463370 SKOR1P84550 965 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 UPP1Q16831 310 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 LRRC31Q6UY01 552 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 CLEC20AQ6ZU45 233 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 CTU1Q7Z7A3 348 aaKnown RBP13.39□□□□□ -0.27
VAPB-203ENST00000463370 UNC45BQ8IWX7 931 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 LRRN4Q8WUT4 740 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 DUSP16Q9BY84 665 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 NOD1Q9Y239 953 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 APOC4-APOC2K7ER74 178 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 DNALI1O14645 258 aaPredicted RBP13.39□□□□□ -0.27
VAPB-203ENST00000463370 XPO1O14980 1071 aaKnown RBP13.39□□□□□ -0.27
VAPB-203ENST00000463370 MAP3K6O95382 1288 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 APOC2P02655 101 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 ACTN2P35609 894 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 EIF3BP55884 814 aaKnown RBP13.39□□□□□ -0.27
VAPB-203ENST00000463370 MAGOHP61326 146 aaKnown RBP13.39□□□□□ -0.27
VAPB-203ENST00000463370 GNGT1P63211 74 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 LMNB2Q03252 620 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 GAD2Q05329 585 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 TIGD5Q53EQ6 642 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 FOXR1Q6PIV2 292 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 PCSK9Q8NBP7 692 aaKnown RBP13.39□□□□□ -0.27
VAPB-203ENST00000463370 RHOBTB2Q9BYZ6 727 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 RSAD1Q9HA92 442 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 INPP5FQ9Y2H2 1132 aa13.39□□□□□ -0.27
VAPB-203ENST00000463370 MKI67P46013 3256 aaKnown RBP13.39□□□□□ -0.27
VAPB-203ENST00000463370 A0A0U1RQF3 1178 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 ZNF623O75123 536 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 NPR3P17342 541 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 MAP3K7CLP57077 242 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 PTK7Q13308 1070 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 MBTPS1Q14703 1052 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 CD300LGQ6UXG3 332 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 HACE1Q8IYU2 909 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 PQLC3Q8N755 202 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 SPATA18Q8TC71 538 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 HSFY1Q96LI6 401 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 KCNK16Q96T55 309 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 TBCBQ99426 244 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 PCDH18Q9HCL0 1135 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 KRT82Q9NSB4 513 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 NINJ2Q9NZG7 142 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms