RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 ASCL5Q7RTU5 278 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 SLC4A11Q8NBS3 891 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 TMEM176AQ96HP8 235 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 ECT2Q9H8V3 914 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 CYP26A1O43174 497 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 COCHO43405 550 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 CD19P15391 556 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 PGFP49763 221 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 RAD23BP54727 409 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 MLLT6P55198 1093 aaPredicted RBP19■□□□□ 0.63
LINC00960-201ENST00000463183 MCCD1P59942 119 aaPredicted RBP19■□□□□ 0.63
LINC00960-201ENST00000463183 SLC7A9P82251 487 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 EML3Q32P44 896 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 TRIML1Q8N9V2 468 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 OVCA2Q8WZ82 227 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 ATP2A3Q93084 1043 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 FBXO44Q9H4M3 255 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 CSNK1G1Q9HCP0 422 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 COQ4Q9Y3A0 265 aa19■□□□□ 0.63
LINC00960-201ENST00000463183 RIF1Q5UIP0 2472 aaKnown RBP18.99■□□□□ 0.63
LINC00960-201ENST00000463183 PTPRZ1P23471 2315 aaPredicted RBP18.99■□□□□ 0.63
LINC00960-201ENST00000463183 PFKLP17858 780 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 GJA4P35212 333 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 AMPD2Q01433 879 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 CETN1Q12798 172 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 GRSF1Q12849 480 aaKnown RBP eCLIP18.99■□□□□ 0.63
LINC00960-201ENST00000463183 GAS6Q14393 721 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 PPM1KQ8N3J5 372 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 TTC39CQ8N584 583 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 CHFRQ96EP1 664 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 NT5C1BQ96P26 610 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 DUSP16Q9BY84 665 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 CLSTN2Q9H4D0 955 aa18.99■□□□□ 0.63
LINC00960-201ENST00000463183 PRR23AA6NEV1 266 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 TLR5O60602 858 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 OLFM2O95897 454 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 YWHAEP62258 255 aaKnown RBP18.98■□□□□ 0.63
LINC00960-201ENST00000463183 SATB1Q01826 763 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 GOLGA7BQ2TAP0 167 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 DGKKQ5KSL6 1271 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 ZC3H14Q6PJT7 736 aaKnown RBP18.98■□□□□ 0.63
LINC00960-201ENST00000463183 KAT5Q92993 513 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 TLR8Q9NR97 1041 aaKnown RBP18.98■□□□□ 0.63
LINC00960-201ENST00000463183 COMMD8Q9NX08 183 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 NUDT5Q9UKK9 219 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 FBXO4Q9UKT5 387 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 SH3BP1Q9Y3L3 701 aa18.98■□□□□ 0.63
LINC00960-201ENST00000463183 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.98■□□□□ 0.63
LINC00960-201ENST00000463183 A0A1W2PQH9 124 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 HHLA1C9JL84 531 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 NFATC1O95644 943 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 GNA14O95837 355 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 TBX18O95935 607 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 EGFP01133 1207 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 AFPP02771 609 aaKnown RBP18.97■□□□□ 0.63
LINC00960-201ENST00000463183 CCDC192P0DO97 292 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 TBXAS1P24557 533 aaPredicted RBP18.97■□□□□ 0.63
LINC00960-201ENST00000463183 GALK1P51570 392 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 CCR3P51677 355 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 KCNH2Q12809 1159 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 NR1H3Q13133 447 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 TPD52L1Q16890 204 aaPredicted RBP18.97■□□□□ 0.63
LINC00960-201ENST00000463183 FSTL4Q6MZW2 842 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 RRAGAQ7L523 313 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 FAXDC2Q96IV6 333 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 IPO9Q96P70 1041 aaKnown RBP18.97■□□□□ 0.63
LINC00960-201ENST00000463183 P2RY13Q9BPV8 354 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 NUP62CLQ9H1M0 184 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 FBRSL1Q9HCM7 1045 aaKnown RBP18.97■□□□□ 0.63
LINC00960-201ENST00000463183 IL37Q9NZH6 218 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 NAGPAQ9UK23 515 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 PCDHB4Q9Y5E5 795 aa18.97■□□□□ 0.63
LINC00960-201ENST00000463183 PATJQ8NI35 1801 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 MYO16Q9Y6X6 1858 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 HELZP42694 1942 aaKnown RBP18.96■□□□□ 0.63
LINC00960-201ENST00000463183 PROB1E7EW31 1015 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 MDM4O15151 490 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 FGFR1OPO95684 399 aaKnown RBP18.96■□□□□ 0.63
LINC00960-201ENST00000463183 ZDHHC11BP0C7U3 371 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 CXCL12P48061 93 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 SLC8A3P57103 927 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 CCINQ13939 588 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 SGO2Q562F6 1265 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 TMEM270Q6UE05 265 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 DDX42Q86XP3 938 aaKnown RBP eCLIP18.96■□□□□ 0.63
LINC00960-201ENST00000463183 TRIM59Q8IWR1 403 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 ATRIPQ8WXE1 791 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 CNOT6LQ96LI5 555 aaKnown RBP18.96■□□□□ 0.63
LINC00960-201ENST00000463183 HINFPQ9BQA5 517 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 NMUR1Q9HB89 426 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 PRMT8Q9NR22 394 aaPredicted RBP18.96■□□□□ 0.63
LINC00960-201ENST00000463183 C2orf42Q9NWW7 574 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 OSER1Q9NX31 292 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 RWDD2AQ9UIY3 292 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 TSPAN16Q9UKR8 245 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 SCML2Q9UQR0 700 aa18.96■□□□□ 0.63
LINC00960-201ENST00000463183 ATG2BQ96BY7 2078 aa18.95■□□□□ 0.62
LINC00960-201ENST00000463183 FAM92AA1XBS5 289 aa18.95■□□□□ 0.62
LINC00960-201ENST00000463183 CALCAP01258 141 aa18.95■□□□□ 0.62
LINC00960-201ENST00000463183 TCF3P15923 654 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms