RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ZCCHC9Q8N567 271 aaKnown RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 TOP6BLQ8N6T0 577 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 B3GALNT2Q8NCR0 500 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 TSPYL1Q9H0U9 437 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 TSPYL2Q9H2G4 693 aaPredicted RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 RSAD1Q9HA92 442 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 SPC25Q9HBM1 224 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 PCDH9Q9HC56 1237 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 NGRNQ9NPE2 291 aaKnown RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 TPX2Q9ULW0 747 aaKnown RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 CEP350Q5VT06 3117 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 CLDN5O00501 218 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 GABRDO14764 452 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 PRPSAP2O60256 369 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 MGEA5O60502 916 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 AOC2O75106 756 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 BEST1O76090 585 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 IFNB1P01574 187 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 SDC4P31431 198 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 LSP1P33241 339 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 ATXN1P54253 815 aaKnown RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 C6orf118Q5T5N4 469 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 SCYL2Q6P3W7 929 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 SLC26A9Q7LBE3 791 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 RSPH3Q86UC2 560 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 TTC13Q8NBP0 860 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 C3orf58Q8NDZ4 430 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 CCHCR1Q8TD31 782 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 NDRG1Q92597 394 aaKnown RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 HHIPL1Q96JK4 782 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 C9orf72Q96LT7 481 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 RNF157Q96PX1 679 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 FRMD8P1Q9BZ68 369 aaPredicted RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 MAGEB5Q9BZ81 275 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 CHST12Q9NRB3 414 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 CASP8AP2Q9UKL3 1982 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 A6NNZ2 444 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 APOC4-APOC2K7ER74 178 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 RASGRF2O14827 1237 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 RGS16O15492 202 aaPredicted RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 APOC2P02655 101 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 PTPN1P18031 435 aaKnown RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 CLCNKBP51801 687 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 NRLP54845 237 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 LONRF1Q17RB8 773 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 TUBB8Q3ZCM7 444 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 BOLA3Q53S33 107 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 PAXIP1Q6ZW49 1069 aaPredicted RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 ARFGAP2Q8N6H7 521 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 CENPIQ92674 756 aaPredicted RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 SENP8Q96LD8 212 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 HNRNPABQ99729 332 aaKnown RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 SNRNP25Q9BV90 132 aaKnown RBP10.63□□□□□ -0.71
MSH5-211ENST00000463144 PCDH18Q9HCL0 1135 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 CYLDQ9NQC7 956 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 CALCOCO1Q9P1Z2 691 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 PADI3Q9ULW8 664 aa10.63□□□□□ -0.71
MSH5-211ENST00000463144 ARL5CA6NH57 179 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 THP07101 528 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
MSH5-211ENST00000463144 CD52P31358 61 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 RPL22P35268 128 aaKnown RBP10.62□□□□□ -0.71
MSH5-211ENST00000463144 THPOP40225 353 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 MAGEA4P43358 317 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 PTPN9P43378 593 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 EIF3EP60228 445 aaKnown RBP10.62□□□□□ -0.71
MSH5-211ENST00000463144 GAD2Q05329 585 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 PTGISQ16647 500 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 FAM182AQ5T1J6 154 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 MFSD5Q6N075 450 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 MRPL10Q7Z7H8 261 aaKnown RBP10.62□□□□□ -0.71
MSH5-211ENST00000463144 PIGZQ86VD9 579 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 PQLC3Q8N755 202 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 MDM1Q8TC05 714 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 BCAS4Q8TDM0 211 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 TEKT4Q8WW24 435 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 PKNOX2Q96KN3 472 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 TNIP3Q96KP6 325 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 HSFY1Q96LI6 401 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 RBM15Q96T37 977 aaKnown RBP eCLIP10.62□□□□□ -0.714e-7■■■□□ 15.4
MSH5-211ENST00000463144 PAAF1Q9BRP4 392 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 DUSP16Q9BY84 665 aa10.62□□□□□ -0.71
MSH5-211ENST00000463144 ROPN1BQ9BZX4 212 aaPredicted RBP10.62□□□□□ -0.71
MSH5-211ENST00000463144 ROPN1Q9HAT0 212 aaPredicted RBP10.62□□□□□ -0.71
MSH5-211ENST00000463144 FARP1Q9Y4F1 1045 aaPredicted RBP10.62□□□□□ -0.71
MSH5-211ENST00000463144 XPO1O14980 1071 aaKnown RBP10.61□□□□□ -0.71
MSH5-211ENST00000463144 ALDH1A1P00352 501 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 FAM163BP0C2L3 166 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 RBP3P10745 1247 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 SCNN1AP37088 669 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 SCNN1GP51170 649 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 SEC24CP53992 1094 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 SNX16P57768 344 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 ADCY1Q08828 1119 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 FASTKD3Q14CZ7 662 aaKnown RBP10.61□□□□□ -0.71
MSH5-211ENST00000463144 MORF4L2Q15014 288 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 NOMO1Q15155 1222 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 ANKRD22Q5VYY1 191 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 ARCQ7LC44 396 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms