RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 MBD3L2Q8NHZ7 208 aaPredicted RBP6.45□□□□□ -1.38
COPS3-205ENST00000463097 HMGB4Q8WW32 186 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 FAM168AQ92567 244 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 KCNN1Q92952 543 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 MARS2Q96GW9 593 aaKnown RBP6.45□□□□□ -1.38
COPS3-205ENST00000463097 PHACTR3Q96KR7 559 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 SIGLEC10Q96LC7 697 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 HIST1H2AAQ96QV6 131 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 PTDSS2Q9BVG9 487 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 ZCWPW1Q9H0M4 648 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 CCDC68Q9H2F9 335 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 CXorf36Q9H7Y0 433 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 GBA2Q9HCG7 927 aaPredicted RBP6.45□□□□□ -1.38
COPS3-205ENST00000463097 VPS51Q9UID3 782 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 USP22Q9UPT9 525 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 IRAK3Q9Y616 596 aa6.45□□□□□ -1.38
COPS3-205ENST00000463097 CCDC195A0A1B0GUA6 201 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 SH3D21A4FU49 640 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 FAM90A20PA6NIJ5 464 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 CER1O95813 267 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 HGFP14210 728 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 MGAT1P26572 445 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 ABCD3P28288 659 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 KRT20P35900 424 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 MAGEA10P43363 369 aaPredicted RBP6.44□□□□□ -1.38
COPS3-205ENST00000463097 CCT4P50991 539 aaKnown RBP6.44□□□□□ -1.38
COPS3-205ENST00000463097 CCR9P51686 369 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 CHN2P52757 468 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 GALNT2Q10471 571 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 FHL3Q13643 280 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 CCDC184Q52MB2 194 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 ANO7Q6IWH7 933 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 TMEM108Q6UXF1 575 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 B4GALNT4Q76KP1 1039 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.44□□□□□ -1.38
COPS3-205ENST00000463097 TRABD2AQ86V40 505 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 ARMC8Q8IUR7 673 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 TBC1D22AQ8WUA7 517 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 LCORQ96JN0 433 aaPredicted RBP6.44□□□□□ -1.38
COPS3-205ENST00000463097 C12orf65Q9H3J6 166 aaKnown RBP6.44□□□□□ -1.38
COPS3-205ENST00000463097 GHITMQ9H3K2 345 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 SMOC2Q9H3U7 446 aa6.44□□□□□ -1.38
COPS3-205ENST00000463097 VSX1Q9NZR4 365 aaPredicted RBP6.44□□□□□ -1.38
COPS3-205ENST00000463097 NDRG4Q9ULP0 352 aaKnown RBP6.44□□□□□ -1.38
COPS3-205ENST00000463097 KIF28PB7ZC32 967 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 KLK10O43240 276 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 AHCYL1O43865 530 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 LARGE1O95461 756 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 SPATA31D3P0C874 917 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 CPA1P15085 419 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 ALOX12P18054 663 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 GNAT2P19087 354 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 NTSR1P30989 418 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 PRKAR1BP31321 381 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 PSMC2P35998 433 aaKnown RBP6.43□□□□□ -1.38
COPS3-205ENST00000463097 PGM1P36871 562 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 STAT1P42224 750 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 PGDP52209 483 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 ARF3P61204 181 aaPredicted RBP6.43□□□□□ -1.38
COPS3-205ENST00000463097 ADAM17P78536 824 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 ARF1P84077 181 aaKnown RBP6.43□□□□□ -1.38
COPS3-205ENST00000463097 SF3A3Q12874 501 aaKnown RBP eCLIP6.43□□□□□ -1.38
COPS3-205ENST00000463097 CCNIQ14094 377 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 NFIXQ14938 502 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 GPR68Q15743 365 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 MFSD5Q6N075 450 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 SPATA31D4Q6ZUB0 917 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 TMTC3Q6ZXV5 915 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 LRRC8DQ7L1W4 858 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 RASGRP2Q7LDG7 609 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 KBTBD2Q8IY47 623 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 NGEFQ8N5V2 710 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 ADAMTS17Q8TE56 1095 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 STAMQ92783 540 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 ZBTB45Q96K62 511 aaPredicted RBP6.43□□□□□ -1.38
COPS3-205ENST00000463097 PNKPQ96T60 521 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 LIN7CQ9NUP9 197 aaKnown RBP6.43□□□□□ -1.38
COPS3-205ENST00000463097 HSF4Q9ULV5 492 aa6.43□□□□□ -1.38
COPS3-205ENST00000463097 NOL7Q9UMY1 257 aaKnown RBP6.43□□□□□ -1.38
COPS3-205ENST00000463097 SAC3D1A6NKF1 404 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 CYP21A2P08686 494 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 ITGALP20701 1170 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 TGM1P22735 817 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 NPTX2P47972 431 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 GATMP50440 423 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 RAC3P60763 192 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 CAP1Q01518 475 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 PDCLQ13371 301 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 E2F2Q14209 437 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 NRN1LQ496H8 165 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 ZMYM1Q5SVZ6 1142 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 UBXN11Q5T124 520 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 CFAP58Q5T655 872 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 NAA35Q5VZE5 725 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 ARMC3Q5W041 872 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 ENOSF1Q7L5Y1 443 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 ANKRD23Q86SG2 305 aa6.42□□□□□ -1.38
COPS3-205ENST00000463097 SLC15A3Q8IY34 581 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms