RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 WASP42768 502 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 NOP14P78316 857 aaKnown RBP16.71■□□□□ 0.27
SND1-203ENST00000463020 SIM1P81133 766 aaPredicted RBP16.71■□□□□ 0.27
SND1-203ENST00000463020 LYSMD4Q5XG99 296 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 LARP1BQ659C4 914 aaKnown RBP16.71■□□□□ 0.27
SND1-203ENST00000463020 SLC23A3Q6PIS1 610 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 ETFBKMTQ8IXQ9 262 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 GPD1LQ8N335 351 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 MYCBPAPQ8TBZ2 947 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 CD248Q9HCU0 757 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 BCCIPQ9P287 314 aaKnown RBP eCLIP16.71■□□□□ 0.27
SND1-203ENST00000463020 STK17AQ9UEE5 414 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 NEUROG3Q9Y4Z2 214 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 IGSF10Q6WRI0 2623 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 TMEM8BA6NDV4 472 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 MAP3K13O43283 966 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 COCHO43405 550 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 APODP05090 189 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 CFIP05156 583 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 MBL2P11226 248 aaPredicted RBP16.7■□□□□ 0.26
SND1-203ENST00000463020 GABRG2P18507 467 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 LMAN2Q12907 356 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 RRAGBQ5VZM2 374 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 SLC41A1Q8IVJ1 513 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 CHCHD4Q8N4Q1 142 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 SPRYD3Q8NCJ5 442 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 P2RY11Q96G91 374 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 ANKRD36BP1Q96IX9 119 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 C8orf48Q96LL4 319 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 CAMK1GQ96NX5 476 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 MMS19Q96T76 1030 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 ACOX2Q99424 681 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 GTPBP2Q9BX10 602 aaKnown RBP16.7■□□□□ 0.26
SND1-203ENST00000463020 NUSAP1Q9BXS6 441 aaKnown RBP16.7■□□□□ 0.26
SND1-203ENST00000463020 B3GNT5Q9BYG0 378 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 SLC6A17Q9H1V8 727 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 CAPN10Q9HC96 672 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 SMC3Q9UQE7 1217 aa16.7■□□□□ 0.26
SND1-203ENST00000463020 PCNX2A6NKB5 2137 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 A0A1W2PQF6 199 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 ALDH1A2O94788 518 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 LDHAP00338 332 aaKnown RBP16.69■□□□□ 0.26
SND1-203ENST00000463020 ANXA13P27216 316 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 GRIA2P42262 883 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 MYO1EQ12965 1108 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 LRSAM1Q6UWE0 723 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 SV2BQ7L1I2 683 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 DPH6Q7L8W6 267 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 HS2ST1Q7LGA3 356 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 BRAPQ7Z569 592 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 BBS7Q8IWZ6 715 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 SCAMP5Q8TAC9 235 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 SPACA7Q96KW9 195 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 KCNK16Q96T55 309 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 CCSER2Q9H7U1 834 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 PANK4Q9NVE7 773 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 CALCOCO1Q9P1Z2 691 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 LHX6Q9UPM6 363 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 MSRB2Q9Y3D2 182 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 PCDHB13Q9Y5F0 798 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 PI4KAP42356 2102 aa16.69■□□□□ 0.26
SND1-203ENST00000463020 BPTFQ12830 3046 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 TRIM66O15016 1216 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 TULP3O75386 442 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 BMP15O95972 392 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 CD59P13987 128 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 PFKLP17858 780 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 PTPN1P18031 435 aaKnown RBP16.68■□□□□ 0.26
SND1-203ENST00000463020 EIF2DP41214 584 aaKnown RBP16.68■□□□□ 0.26
SND1-203ENST00000463020 TNFRSF4P43489 277 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 PDE6CP51160 858 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 CEBPZQ03701 1054 aaKnown RBP16.68■□□□□ 0.26
SND1-203ENST00000463020 EOGTQ5NDL2 527 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 EGFLAMQ63HQ2 1017 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 PAQR9Q6ZVX9 377 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 TRAPPC11Q7Z392 1133 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 TMEM25Q86YD3 366 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 PGBD3Q8N328 593 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 CCDC26Q8TAB7 109 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 ZNF516Q92618 1163 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 POLMQ9NP87 494 aaPredicted RBP16.68■□□□□ 0.26
SND1-203ENST00000463020 HSPBP1Q9NZL4 362 aa16.68■□□□□ 0.26
SND1-203ENST00000463020 CHORDC1Q9UHD1 332 aaPredicted RBP16.68■□□□□ 0.26
SND1-203ENST00000463020 SRPRBQ9Y5M8 271 aaKnown RBP16.68■□□□□ 0.26
SND1-203ENST00000463020 GCN1Q92616 2671 aaKnown RBP16.68■□□□□ 0.26
SND1-203ENST00000463020 IGHV1OR15-9A0A0B4J2B8 117 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 GREM1O60565 184 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 ADH1CP00326 375 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 TNNC2P02585 160 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 GNL1P36915 607 aaPredicted RBP16.67■□□□□ 0.26
SND1-203ENST00000463020 RPL6Q02878 288 aaKnown RBP16.67■□□□□ 0.26
SND1-203ENST00000463020 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 MINDY1Q8N5J2 469 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 ZNF513Q8N8E2 541 aaPredicted RBP16.67■□□□□ 0.26
SND1-203ENST00000463020 RDH13Q8NBN7 331 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 OR6B3Q8NGW1 331 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 CCDC39Q9UFE4 941 aa16.67■□□□□ 0.26
SND1-203ENST00000463020 MYO18AQ92614 2054 aaKnown RBP16.66■□□□□ 0.26
SND1-203ENST00000463020 VPS37CA5D8V6 355 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms