RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 KDELR1P24390 212 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 TUSC3Q13454 348 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 CCDC14Q49A88 953 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 PAN2Q504Q3 1202 aaKnown RBP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 RAB6CQ53S08 254 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 KCTD6Q8NC69 237 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 CLEC4CQ8WTT0 213 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 CFAP57Q96MR6 1250 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 HNRNPABQ99729 332 aaKnown RBP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 RAB6CQ9H0N0 254 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 MTRF1LQ9UGC7 380 aaKnown RBP15.16■□□□□ 0.02
HDAC6-213ENST00000462730 SCN5AQ14524 2016 aa15.16■□□□□ 0.02
HDAC6-213ENST00000462730 CLDN5O00501 218 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 GABRDO14764 452 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 ACADSBP45954 432 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 IRAK1P51617 712 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 C1QTNF8P60827 252 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 ATP11AP98196 1134 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 CALCOCO2Q13137 446 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 PLEKHG4Q58EX7 1191 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 CLLU1OSQ5K130 101 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 GLB1LQ6UWU2 654 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 SLC39A5Q6ZMH5 540 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 ANKRD33Q7Z3H0 272 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 CTU1Q7Z7A3 348 aaKnown RBP15.15■□□□□ 0.02
HDAC6-213ENST00000462730 KHSRPQ92945 711 aaKnown RBP eCLIP15.15■□□□□ 0.02
HDAC6-213ENST00000462730 ART4Q93070 314 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 MED10Q9BTT4 135 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 TXLNGYQ9BZA5 131 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 CYLDQ9NQC7 956 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 DDX43Q9NXZ2 648 aaKnown RBP15.15■□□□□ 0.02
HDAC6-213ENST00000462730 WHRNQ9P202 907 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 ATP8A1Q9Y2Q0 1164 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 XPO1O14980 1071 aaKnown RBP15.15■□□□□ 0.02
HDAC6-213ENST00000462730 PRPSAP2O60256 369 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 B3GAT3O94766 335 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 CD48P09326 243 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 ATF2P15336 505 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 SDC4P31431 198 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 RPL34P49207 117 aaKnown RBP15.15■□□□□ 0.02
HDAC6-213ENST00000462730 VPS41P49754 854 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 DYNLT1P63172 113 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 FAM189BP81408 668 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 TAZQ16635 292 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 TRIM60Q495X7 471 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 LRIG3Q6UXM1 1119 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 ZNF365Q70YC5 407 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 GSTA5Q7RTV2 222 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 FUKQ8N0W3 1084 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 TMEM86AQ8N2M4 240 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 DIS3LQ8TF46 1054 aaKnown RBP15.15■□□□□ 0.02
HDAC6-213ENST00000462730 HASPINQ8TF76 798 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 FAM172AQ8WUF8 416 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 PPM1EQ8WY54 764 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 SNF8Q96H20 258 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 SCLYQ96I15 445 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 HSFY1Q96LI6 401 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 SYT15Q9BQS2 421 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 FAM129AQ9BZQ8 928 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 HIPK3Q9H422 1215 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 NGRNQ9NPE2 291 aaKnown RBP15.15■□□□□ 0.02
HDAC6-213ENST00000462730 DNPEPQ9ULA0 475 aa15.15■□□□□ 0.02
HDAC6-213ENST00000462730 TIMM13Q9Y5L4 95 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-213ENST00000462730 ANKRD65E5RJM6 399 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 LHX1P48742 406 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 BYSLQ13895 437 aaKnown RBP15.14■□□□□ 0.01
HDAC6-213ENST00000462730 TIGD5Q53EQ6 642 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 KIAA0319Q5VV43 1072 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 DRICH1Q6PGQ1 229 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-213ENST00000462730 FBXO46Q6PJ61 603 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-213ENST00000462730 CYP4V2Q6ZWL3 525 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-213ENST00000462730 RFX6Q8HWS3 928 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 CMASQ8NFW8 434 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-213ENST00000462730 ARL8AQ96BM9 186 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 CAPS2Q9BXY5 557 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 DUSP16Q9BY84 665 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 CRTAC1Q9NQ79 661 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 EFR3BQ9Y2G0 817 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 NEU2Q9Y3R4 380 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 TET1Q8NFU7 2136 aa15.14■□□□□ 0.01
HDAC6-213ENST00000462730 I3L4J1 428 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 B4GALT3O60512 393 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 KRT14P02533 472 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 NPR3P17342 541 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 DESP17661 470 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 SCNN1AP37088 669 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 ADCY8P40145 1251 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 CDR1P51861 262 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 VCPP55072 806 aaKnown RBP15.13■□□□□ 0.01
HDAC6-213ENST00000462730 SLC8A3P57103 927 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 LMNB2Q03252 620 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 FAAP100Q0VG06 881 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 TTMPQ5BVD1 217 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 SCYL2Q6P3W7 929 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 BBS12Q6ZW61 710 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 SLC26A9Q7LBE3 791 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 DNAJC5GQ8N7S2 189 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 SEPT8Q92599 483 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms