RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CROTQ9UKG9 612 aa12□□□□□ -0.49
TRAPPC3-205ENST00000462715 SMG5Q9UPR3 1016 aaKnown RBP12□□□□□ -0.49
TRAPPC3-205ENST00000462715 PCDHA2Q9Y5H9 948 aa12□□□□□ -0.49
TRAPPC3-205ENST00000462715 ALPK3Q96L96 1907 aa12□□□□□ -0.49
TRAPPC3-205ENST00000462715 TMEM150BA6NC51 233 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 C22orf31O95567 290 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SPATA31D3P0C874 917 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 FOXN2P32314 431 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 RPL21P46778 160 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 HADHBP55084 474 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 GEMIN4P57678 1058 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 FKBP3Q00688 224 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 MLLT1Q03111 559 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 MED21Q13503 144 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 STAT4Q14765 748 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 TCEAL1Q15170 157 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 KYNUQ16719 465 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 DSTYKQ6XUX3 929 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SPATA31D4Q6ZUB0 917 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SYDE1Q6ZW31 735 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 RELL1Q8IUW5 271 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 KBTBD2Q8IY47 623 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 ANKRD42Q8N9B4 389 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 TTC25Q96NG3 672 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 MIPEPQ99797 713 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 HIPK3Q9H422 1215 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 PPCSQ9HAB8 311 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 STK17AQ9UEE5 414 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 TBX21Q9UL17 535 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 DMTF1Q9Y222 760 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SMIM35A0A1B0GVV1 85 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 ARHGEF35A5YM69 484 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 TRIM43BA6NCK2 446 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 GAS2O43903 313 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 EIF2S1P05198 315 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 GTF2H1P32780 548 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 RARRES1P49788 294 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 ADCY1Q08828 1119 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 ECM1Q16610 540 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 CCDC153Q494R4 210 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 TMEM119Q4V9L6 283 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 TAF1BQ53T94 588 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 C1orf228Q6PIY5 440 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 CLNKQ7Z7G1 428 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SFR1Q86XK3 245 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SNRNP27Q8WVK2 155 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 MCUR1Q96AQ8 359 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SNX27Q96L92 541 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 PRICKLE1Q96MT3 831 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 BTBD9Q96Q07 612 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SIKE1Q9BRV8 207 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 TRIM31Q9BZY9 425 aa11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 TYW1Q9NV66 732 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 SCHIP1Q9P0W5 487 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC3-205ENST00000462715 GYG2O15488 501 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 MAFO75444 373 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 DGAT1O75907 488 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 ANPEPP15144 967 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 RAG1P15918 1043 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 PAX3P23760 479 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 SLCO1A2P46721 670 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 HDAC4P56524 1084 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 GRB10Q13322 594 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 DHRS4L2Q6PKH6 230 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 IZUMO2Q6UXV1 221 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 VPS52Q8N1B4 723 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 C12orf50Q8NA57 414 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 GDAP1Q8TB36 358 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 PLEKHO2Q8TD55 490 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 DENND1AQ8TEH3 1009 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 DDI1Q8WTU0 396 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 PNMA5Q96PV4 448 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 SSU72Q9NP77 194 aaKnown RBP11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 NDE1Q9NXR1 346 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 LOXHD1Q8IVV2 1947 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 ZBTB39O15060 712 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 EXOC3O60645 756 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 TTC4O95801 387 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 TMEM253P0C7T8 217 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 UQCRBP14927 111 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 PLCG1P19174 1290 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 ITIH2P19823 946 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 CALCOCO2Q13137 446 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 MPP2Q14168 576 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 INAQ16352 499 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 EFCAB12Q6NXP0 572 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 ZNF449Q6P9G9 518 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 RFWD3Q6PCD5 774 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 OLFML1Q6UWY5 402 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 EPM2AIP1Q7L775 607 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 NLRP9Q7RTR0 991 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 PDSS2Q86YH6 399 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 TRIM59Q8IWR1 403 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 ZC3H3Q8IXZ2 948 aaKnown RBP11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 ALLCQ8N6M5 410 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 SH2D3AQ9BRG2 576 aa11.98□□□□□ -0.49
TRAPPC3-205ENST00000462715 FOXP3Q9BZS1 431 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms