RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 LETMD1Q6P1Q0 360 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 TMEM184AQ6ZMB5 413 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 CILP2Q8IUL8 1156 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 GPD1LQ8N335 351 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 URGCPQ8TCY9 931 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 CCDC34Q96HJ3 373 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 ZNF558Q96NG5 402 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 SLC38A3Q99624 504 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 MSTO1Q9BUK6 570 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 RHOBTB2Q9BYZ6 727 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 TRIM6Q9C030 488 aaPredicted RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 RXFP1Q9HBX9 757 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 SLC38A7Q9NVC3 462 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 SPG21Q9NZD8 308 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 HSPBP1Q9NZL4 362 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 ANKFY1Q9P2R3 1169 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 TPX2Q9ULW0 747 aaKnown RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 OBSL1O75147 1896 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 PTPRJQ12913 1337 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 F8W810 466 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 IKBKBO14920 756 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 KIF20AO95235 890 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 SMC2O95347 1197 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 MBD3O95983 291 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 NR3C1P04150 777 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 SOD2P04179 222 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 GLI1P08151 1106 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 CCNE1P24864 410 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 CTNNB1P35222 781 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 KIR3DL1P43629 444 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 ACOT2P49753 483 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 PMS1P54277 932 aaKnown RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 ERVFC1P60507 584 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 DSG1Q02413 1049 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 LRRC63Q05C16 580 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 CYP24A1Q07973 514 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 GPM6BQ13491 265 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 HSP90AA2PQ14568 343 aaPredicted RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 SNRNP35Q16560 246 aaKnown RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 PAN2Q504Q3 1202 aaKnown RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 SEZ6Q53EL9 994 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 PRAMEF13Q5VWM6 474 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 JADE1Q6IE81 842 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 DCLRE1AQ6PJP8 1040 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 HS2ST1Q7LGA3 356 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 CBWD2Q8IUF1 395 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 THNSL1Q8IYQ7 743 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 MRPL43Q8N983 215 aaKnown RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 XXYLT1Q8NBI6 393 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 SPATA18Q8TC71 538 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 PARD3BQ8TEW8 1205 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 GDPD5Q8WTR4 605 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 POF1BQ8WVV4 589 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 POMGNT1Q8WZA1 660 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 ERCC4Q92889 916 aaPredicted RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 SMARCE1Q969G3 411 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 DHTKD1Q96HY7 919 aaPredicted RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 DUSP9Q99956 384 aaKnown RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 FUCA2Q9BTY2 467 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 HERC2P3Q9BVR0 1158 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 GPR62Q9BZJ7 368 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 ZHX3Q9H4I2 956 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 PRDM12Q9H4Q4 367 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 RPF1Q9H9Y2 349 aaKnown RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 INTS13Q9NVM9 706 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 GDAP2Q9NXN4 497 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 SIX4Q9UIU6 781 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 HOOK1Q9UJC3 728 aaKnown RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 ADAM28Q9UKQ2 775 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 UBQLN1Q9UMX0 589 aaKnown RBP6.2□□□□□ -1.42
VPS36-202ENST00000462289 PCDHB12Q9Y5F1 795 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 AK5Q9Y6K8 562 aa6.2□□□□□ -1.42
VPS36-202ENST00000462289 ANAPC1Q9H1A4 1944 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 TRIOO75962 3097 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 FSD2A1L4K1 749 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 C2orf71A6NGG8 1288 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 ZNF233A6NK53 670 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 H3BS24 57 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 RFXAPO00287 272 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 SYN3O14994 580 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 SLC16A3O15427 465 aaKnown RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 ZC3H11AO75152 810 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS36-202ENST00000462289 AKAP3O75969 853 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 OAZ2O95190 189 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 GLP2RO95838 553 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 POMCP01189 267 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 C4BPAP04003 597 aaKnown RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 ALDH2P05091 517 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 FAM163BP0C2L3 166 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 LTBRP36941 435 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 PBX3P40426 434 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 ALDH7A1P49419 539 aaKnown RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 CASP4P49662 377 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 CLCNKBP51801 687 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 YARSP54577 528 aaKnown RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 LILRA4P59901 499 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 SURF1Q15526 300 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 PTPN14Q15678 1187 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms