RNA–Protein interactions for RNA: ENST00000461819.5

CCDC28B-203, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 5

Gene CCDC28B, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-203ENST00000461819 PLA2G4AP47712 749 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 FAM71AQ8IYT1 594 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 ZNF606Q8WXB4 792 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 SPAG5Q96R06 1193 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 PLA2G2FQ9BZM2 168 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 LRRC4Q9HBW1 653 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 TLR8Q9NR97 1041 aaKnown RBP24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 A0A1B0GTH6 734 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 HEPACAM2A8MVW5 462 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 EPHB6O15197 1021 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 SRFP11831 508 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 WEE1P30291 646 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 BPIFB4P59827 614 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 FANCCQ00597 558 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 GRM2Q14416 872 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 PKDCCQ504Y2 493 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 VITQ6UXI7 678 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 YAF2Q8IY57 180 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 ARL14EPQ8N8R7 260 aaPredicted RBP24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 EDAQ92838 391 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 SLC22A12Q96S37 553 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 CYP2S1Q96SQ9 504 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 TDP1Q9NUW8 608 aa24.07■■□□□ 1.44
CCDC28B-203ENST00000461819 TRIOO75962 3097 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 PFKLP17858 780 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 HDCP19113 662 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 CLCN1P35523 988 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 RGS7P49802 495 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 TKTL1P51854 596 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 ZNF445P59923 1031 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 ADIGQ0VDE8 80 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 RAB41Q5JT25 222 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 CCDC186Q7Z3E2 898 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 SLC47A2Q86VL8 602 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 SIX6OS1Q8N1H7 587 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 CELF5Q8N6W0 485 aaKnown RBP24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 TTC16Q8NEE8 873 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 DEPDC1BQ8WUY9 529 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 NAP1L5Q96NT1 182 aaPredicted RBP24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 EPHX3Q9H6B9 360 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 KIF9Q9HAQ2 790 aa24.06■■□□□ 1.44
CCDC28B-203ENST00000461819 KIF26AQ9ULI4 1882 aaPredicted RBP24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 OAS1P00973 400 aaKnown RBP24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 PSMC3P17980 439 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 MEA1Q16626 185 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 HECTD3Q5T447 861 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 DENND1BQ6P3S1 775 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 CACNA2D4Q7Z3S7 1137 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 MFSD6LQ8IWD5 586 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 RNF214Q8ND24 703 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 SLC35F5Q8WV83 523 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 KCTD13Q8WZ19 329 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 USP13Q92995 863 aaPredicted RBP24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 RSPRY1Q96DX4 576 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 TRMT61BQ9BVS5 477 aaKnown RBP24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 NACA2Q9H009 215 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 OBP2AQ9NY56 170 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 CCL26Q9Y258 94 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 USP3Q9Y6I4 520 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 TICRRQ7Z2Z1 1910 aa24.05■■□□□ 1.44
CCDC28B-203ENST00000461819 CFHP08603 1231 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 ZDHHC11BP0C7U3 371 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 LCP1P13796 627 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 KRT9P35527 623 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 TUBP50607 506 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 UBASH3AP57075 661 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 SIGLEC14Q08ET2 396 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 SNX30Q5VWJ9 437 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 PMF1Q6P1K2 205 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 BPIFB1Q8TDL5 484 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 ULBP1Q9BZM6 244 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 PDCL3Q9H2J4 239 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 NAGPAQ9UK23 515 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 FBXL21Q9UKT6 434 aa24.04■■□□□ 1.44
CCDC28B-203ENST00000461819 A0A1W2PQH9 124 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 GFPT2O94808 682 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 ZBED1O96006 694 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 MBL2P11226 248 aaPredicted RBP24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 SOX5P35711 763 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 STAT1P42224 750 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 PSEN1P49768 467 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 JAM2P57087 298 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 GPC5P78333 572 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 ZNF268Q14587 947 aaPredicted RBP24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 PASD1Q8IV76 773 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 ARHGAP18Q8N392 663 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 CCSER2Q9H7U1 834 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 BRD9Q9H8M2 597 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 SLC2A4RGQ9NR83 387 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 ST7Q9NRC1 585 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 CEP83Q9Y592 693 aa24.03■■□□□ 1.44
CCDC28B-203ENST00000461819 A0A1W2PQC6 194 aa24.02■■□□□ 1.44
CCDC28B-203ENST00000461819 PIK3R2O00459 728 aa24.02■■□□□ 1.44
CCDC28B-203ENST00000461819 ZNF263O14978 683 aa24.02■■□□□ 1.44
CCDC28B-203ENST00000461819 COCHO43405 550 aa24.02■■□□□ 1.44
CCDC28B-203ENST00000461819 TLR5O60602 858 aa24.02■■□□□ 1.44
CCDC28B-203ENST00000461819 CYP11B1P15538 503 aa24.02■■□□□ 1.44
CCDC28B-203ENST00000461819 GDI1P31150 447 aa24.02■■□□□ 1.44
CCDC28B-203ENST00000461819 GPD2P43304 727 aa24.02■■□□□ 1.44
CCDC28B-203ENST00000461819 PGFP49763 221 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms