RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 PKN3Q6P5Z2 889 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.78□□□□□ -0.04
USP4-206ENST00000461553 FILIP1Q7Z7B0 1213 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 FMR1NBQ8N0W7 255 aaPredicted RBP14.78□□□□□ -0.04
USP4-206ENST00000461553 TAS1R2Q8TE23 839 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 ACDQ96AP0 544 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 NACA2Q9H009 215 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 CYP3A43Q9HB55 503 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 C2orf42Q9NWW7 574 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 COMMD8Q9NX08 183 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 CFAP97Q9P2B7 532 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 HOOK1Q9UJC3 728 aaKnown RBP14.78□□□□□ -0.04
USP4-206ENST00000461553 SLC8A2Q9UPR5 921 aa14.78□□□□□ -0.04
USP4-206ENST00000461553 CETN3O15182 167 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 STX10O60499 249 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 CD58P19256 250 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 ADORA2BP29275 332 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 HOXA6P31267 233 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 GTF2H1P32780 548 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 GALK1P51570 392 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 MAP3K7CLP57077 242 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 HECTD3Q5T447 861 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 ZNF658Q5TYW1 1059 aaPredicted RBP14.77□□□□□ -0.05
USP4-206ENST00000461553 NAIF1Q69YI7 327 aaPredicted RBP14.77□□□□□ -0.05
USP4-206ENST00000461553 KRT39Q6A163 491 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 PAQR9Q6ZVX9 377 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 CEP68Q76N32 757 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 WDR5BQ86VZ2 330 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 CRYBG2Q8N1P7 616 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 RPLP0P6Q8NHW5 317 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 CCDC26Q8TAB7 109 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 SCAMP5Q8TAC9 235 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 SMARCE1Q969G3 411 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 GSDMAQ96QA5 445 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 NT5C1AQ9BXI3 368 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 RNF38Q9H0F5 515 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 FBXO44Q9H4M3 255 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 APOBEC3GQ9HC16 384 aaKnown RBP14.77□□□□□ -0.05
USP4-206ENST00000461553 GMIPQ9P107 970 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 USP18Q9UMW8 372 aa14.77□□□□□ -0.05
USP4-206ENST00000461553 TNFRSF10BO14763 440 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 COCHO43405 550 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 ADH1CP00326 375 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 CYP17A1P05093 508 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 ZXDBP98169 803 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 DCAF17Q5H9S7 520 aaPredicted RBP14.76□□□□□ -0.05
USP4-206ENST00000461553 C12orf29Q8N999 325 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 ZMIZ2Q8NF64 920 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 JAKMIP2Q96AA8 810 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 TWNKQ96RR1 684 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 SMOQ99835 787 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 GTPBP4Q9BZE4 634 aaKnown RBP14.76□□□□□ -0.05
USP4-206ENST00000461553 LINC00597Q9H2U6 94 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 CSNK1G1Q9HCP0 422 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 TLR8Q9NR97 1041 aaKnown RBP14.76□□□□□ -0.05
USP4-206ENST00000461553 TBC1D14Q9P2M4 693 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 SH3BP1Q9Y3L3 701 aa14.76□□□□□ -0.05
USP4-206ENST00000461553 NUP205Q92621 2012 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 FAM92AA1XBS5 289 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 SCAMP3O14828 347 aaKnown RBP14.75□□□□□ -0.05
USP4-206ENST00000461553 SLC16A3O15427 465 aaKnown RBP14.75□□□□□ -0.05
USP4-206ENST00000461553 CILPO75339 1184 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 BEST1O76090 585 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 PRCPP42785 496 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 LMNB2Q03252 620 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 SRSF5Q13243 272 aaKnown RBP14.75□□□□□ -0.05
USP4-206ENST00000461553 STIM1Q13586 685 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 COBLL1Q53SF7 1204 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 TCERG1LQ5VWI1 586 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 SNX30Q5VWJ9 437 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 CLEC20AQ6ZU45 233 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 ERMP1Q7Z2K6 904 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 TTC39CQ8N584 583 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 FBXL13Q8NEE6 735 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 RMDN1Q96DB5 314 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 EEF2KMTQ96G04 330 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 HHIPQ96QV1 700 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 HNRNPABQ99729 332 aaKnown RBP14.75□□□□□ -0.05
USP4-206ENST00000461553 CCSER2Q9H7U1 834 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 FBRSL1Q9HCM7 1045 aaKnown RBP14.75□□□□□ -0.05
USP4-206ENST00000461553 IL37Q9NZH6 218 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 PCDHA5Q9Y5H7 936 aa14.75□□□□□ -0.05
USP4-206ENST00000461553 CCDC163A0A0D9SF12 145 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 E2F8A0AVK6 867 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 HRO43593 1189 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 TLR5O60602 858 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 RETP07949 1114 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 ZDHHC11BP0C7U3 371 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 CCDC192P0DO97 292 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 IRF1P10914 325 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 ADH5P11766 374 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 OPRD1P41143 372 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 FOXK2Q01167 660 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 LRRC63Q05C16 580 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 GOLGA8FQ08AF8 430 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 GOLGA8DPQ0D2H9 430 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 DHCR24Q15392 516 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 CAMKK1Q8N5S9 505 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 ENGASEQ8NFI3 743 aa14.74□□□□□ -0.05
USP4-206ENST00000461553 OTUB2Q96DC9 234 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms